Research Centres (23573)

Antimicrobial Resistance Centre (AMR) (807) Month Authors/Creators Item Type Full Text

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Interdisciplinary investigations of phage-bacteria dynamics and generalized transduction of antimicrobial resistance in Staphylococcus aureus. (2022) Leclerc, Q

The prevalence of molecular markers of resistance to sulfadoxine-pyrimethamine among pregnant women at first antenatal clinic attendance and delivery in the forest-savannah area of Ghana. (2022) Dosoo, David Kwame; Bailey, Jeffrey A; Asante, Kwaku Poku; Oppong, Felix Boakye; Niaré, Karamoko; Opoku-Mensah, Jones; Owusu-Agyei, Seth; Greenwood, Brian; Chandramohan, Daniel

Perceptions and reported practices of pregnant women and mothers of children under two years of age regarding antibiotic use and resistance in Vientiane province, Lao PDR: a qualitative study. (2022) Sychareun, Vanphanom; Phounsavath, Paphatsone; Sihavong, Amphoy; Kounnavong, Sengchanh; Chaleunvong, Kongmany; Machowska, Anna; Keohavong, Bounxou; Mayxay, Mayfong; Eriksen, Jaran; Hanson, Claudia; Vongsouvath, Manivanh; Brauner, Annelie; Durham, Jo; Stålsby Lundborg, Cecilia

Antimicrobial resistance patterns in bacteria causing febrile illness in Africa, South Asia, and Southeast Asia: a systematic review of published etiological studies from 1980-2015. (2022) Roberts, Tamalee; Dahal, Prabin; Shrestha, Poojan; Schilling, William; Shrestha, Rujan; Ngu, Roland; Huong, Vu Thi Lan; van Doorn, H Rogier; Phimolsarnnousith, Vilayouth; Miliya, Thyl; Crump, John A; Bell, David; Newton, Paul N; Dittrich, Sabine; Hopkins, Heidi; Stepniewska, Kasia; Guerin, Philippe J; Ashley, Elizabeth A; Turner, Paul

Molecular characterization of drug-resistant Mycobacterium tuberculosis among Filipino patients derived from the national tuberculosis prevalence survey Philippines 2016. (2022) Montoya, Jaime C; Malabad, John Carlo M; Ang, Concepcion F; Reyes, Lorenzo T; Basilio, Ramon P; Lim, Dodge R; Amarillo, Maria Lourdes E; Ama, Ma Cecilia G; Phelan, Jody E; Hibberd, Martin L; Clark, Taane G

The contribution of hospital-acquired infections to the COVID-19 epidemic in England in the first half of 2020. (2022) Knight, Gwenan M; Pham, Thi Mui; Stimson, James; Funk, Sebastian; Jafari, Yalda; Pople, Diane; Evans, Stephanie; Yin, Mo; Brown, Colin S; Bhattacharya, Alex; Hope, Russell; Semple, Malcolm G; ISARIC4C Investigators; CMMID COVID-19 Working Group; Read, Jonathan M; Cooper, Ben S; Robotham, Julie V

TB-PRACTECAL: study protocol for a randomised, controlled, open-label, phase II-III trial to evaluate the safety and efficacy of regimens containing bedaquiline and pretomanid for the treatment of adult patients with pulmonary multidrug-resistant tuberculosis. (2022) Berry, Catherine; du Cros, Philipp; Fielding, Katherine; Gajewski, Suzanne; Kazounis, Emil; McHugh, Timothy D; Merle, Corinne; Motta, Ilaria; Moore, David AJ; Nyang'wa, Bern-Thomas

Monocyte Transcriptional Responses to Mycobacterium tuberculosis Associate with Resistance to Tuberculin Skin Test and Interferon Gamma Release Assay Conversion. (2022) Simmons, Jason D; Dill-McFarland, Kimberly A; Stein, Catherine M; Van, Phu T; Chihota, Violet; Ntshiqa, Thobani; Maenetje, Pholo; Peterson, Glenna J; Benchek, Penelope; Nsereko, Mary; Velen, Kavindhran; Fielding, Katherine L; Grant, Alison D; Gottardo, Raphael; Mayanja-Kizza, Harriet; Wallis, Robert S; Churchyard, Gavin; Boom, W Henry; Hawn, Thomas R

How has mass drug administration with dihydroartemisinin-piperaquine impacted molecular markers of drug resistance? A systematic review. (2022) Moss, Sophie; Mańko, Emilia; Krishna, Sanjeev; Campino, Susana; Clark, Taane G; Last, Anna

Mortality associated with third-generation cephalosporin resistance in Enterobacteriaceae bloodstream infections at one South African hospital. (2022) Dramowski, Angela; Aiken, Alexander M; Rehman, Andrea M; Snyman, Yolandi; Reuter, Sandra; Grundmann, Hajo; Scott, J Anthony G; de Kraker, Marlieke EA; Whitelaw, Andrew

Nonbiomedical factors affecting antibiotic use in the community: authors' response. (2022) Sun, Ruyu; Zhou, Xudong; Lin, Leesa

Genomic dissection of Klebsiella pneumoniae infections in hospital patients reveals insights into an opportunistic pathogen. (2022) Gorrie, Claire L; Mirčeta, Mirjana; Wick, Ryan R; Judd, Louise M; Lam, Margaret MC; Gomi, Ryota; Abbott, Iain J; Thomson, Nicholas R; Strugnell, Richard A; Pratt, Nigel F; Garlick, Jill S; Watson, Kerrie M; Hunter, Peter C; Pilcher, David V; McGloughlin, Steve A; Spelman, Denis W; Wyres, Kelly L; Jenney, Adam WJ; Holt, Kathryn E

Antibiotics for treatment of leptospirosis. (2022) Mukadi, Patrick; Tabei, Kozue; Edwards, Tansy; Brett-Major, David M; Smith, Chris; Kitashoji, Emi; Win, Tin Zar

A prospective observational study of community-acquired bacterial bloodstream infections in Metro Manila, the Philippines. (2022) Saito, Nobuo; Solante, Rontgene M; Guzman, Ferdinand D; Telan, Elizabeth O; Umipig, Dorcas V; Calayo, Joy P; Frayco, Carina H; Lazaro, Jezreel C; Ribo, Maricel R; Dimapilis, Alexis Q; Dimapilis, Virginia O; Villanueva, Annavi M; Mauhay, Jaira L; Suzuki, Motoi; Yasunami, Michio; Koizumi, Nobuo; Kitashoji, Emi; Sakashita, Kentaro; Yasuda, Ikkoh; Nishiyama, Akira; Smith, Chris; Ariyoshi, Koya; Parry, Christopher M

Transmission of Klebsiella strains and plasmids within and between grey-headed flying fox colonies. (2022) Vezina, Ben; Judd, Louise M; McDougall, Fiona K; Boardman, Wayne SJ; Power, Michelle L; Hawkey, Jane; Brisse, Sylvain; Monk, Jonathan M; Holt, Kathryn E; Wyres, Kelly L

The global impact of household contact management for children on multidrug-resistant and rifampicin-resistant tuberculosis cases, deaths, and health-system costs in 2019: a modelling study. (2022) Dodd, Peter J; Mafirakureva, Nyashadzaishe; Seddon, James A; McQuaid, Christopher F

Genomic epidemiology and temperature dependency of hypermucoviscous Klebsiella pneumoniae in Japan. (2022) Le, Mi Nguyen-Tra; Kayama, Shizuo; Wyres, Kelly L; Yu, Liansheng; Hisatsune, Junzo; Suzuki, Masato; Yahara, Koji; Terachi, Tsuneko; Sawa, Kana; Takahashi, Shin; Okuhara, Toshihiko; Kohama, Kunihiko; Holt, Kathryn E; Mizutani, Tetsu; Ohge, Hiroki; Sugai, Motoyuki

The Antioxidant Effect of Natural Antimicrobials in Shrimp Primary Intestinal Cells Infected with Nematopsis messor. (2022) Balta, Igori; Stef, Lavinia; Butucel, Eugenia; Gradisteanu Pircalabioru, Gratiela; Venig, Adelina; Ward, Patrick; Deshaies, Myriam; Pet, Ioan; Stef, Ducu; Koyun, Osman Y; Callaway, Todd R; Gundogdu, Ozan; Corcionivoschi, Nicolae

Characterisation of drug-resistant Mycobacterium tuberculosis mutations and transmission in Pakistan. (2022) Napier, Gary; Khan, Anwar Sheed; Jabbar, Abdul; Khan, Muhammad Tahir; Ali, Sajid; Qasim, Muhammad; Mohammad, Noor; Hasan, Rumina; Hasan, Zahra; Campino, Susana; Ahmad, Sajjad; Khattak, Baharullah; Waddell, Simon J; Khan, Taj Ali; Phelan, Jody E; Clark, Taane G picture_as_pdf

Epidemiological Prevalence of Phenotypical Resistances and Mobilised Colistin Resistance in Avian Commensal and Pathogenic E. coli from Denmark, France, The Netherlands, and the UK. (2022) Mead, Andrew; Billon-Lotz, Candice; Olsen, Rikke; Swift, Ben; Richez, Pascal; Stabler, Richard; Pelligand, Ludovic

How conflicts of interest hinder effective regulation of healthcare: an analysis of antimicrobial use regulation in Cambodia, Indonesia and Pakistan. (2022) Khan, Mishal; Rahman-Shepherd, Afifah; Bory, Sothavireak; Chhorn, Sophea; Durrance-Bagale, Anna; Hasan, Rumina; Heng, Sotheara; Phou, Socheata; Prien, Chanra; Probandari, Ari; Saphonn, Vonthanak; Suy, Sovanthida; Wiseman, Virginia; Wulandari, Luh Putu Lila; Hanefeld, Johanna

Knowledge, attitudes and practices relating to antibiotic use and resistance among prescribers from public primary healthcare facilities in Harare, Zimbabwe. (2022) Olaru, Ioana D; Ferrand, Rashida A; Yeung, Shunmay; Chingono, Rudo; Chonzi, Prosper; Masunda, Kudzai PE; Dixon, Justin; Kranzer, Katharina

Growth-Dependent Predation and Generalized Transduction of Antimicrobial Resistance by Bacteriophage. (2022) Leclerc, Quentin J; Wildfire, Jacob; Gupta, Arya; Lindsay, Jodi A; Knight, Gwenan M

β-Lactam-Resistant Streptococcus pneumoniae Dynamics Following Treatment: A Dose-Response Meta-analysis. (2022) Griskaitis, Matas; Furuya-Kanamori, Luis; Allel, Kasim; Stabler, Richard; Harris, Patrick; Paterson, David L; Yakob, Laith

Availability, Prices and Affordability of Antibiotics Stocked by Informal Providers in Rural India: A Cross-Sectional Survey. (2022) Gautham, Meenakshi; Miller, Rosalind; Rego, Sonia; Goodman, Catherine

Molecular characterisation of second-line drug resistance among drug resistant tuberculosis patients tested in Uganda: a two and a half-year's review. (2022) Mujuni, Dennis; Kasemire, Dianah Linda; Ibanda, Ivan; Kabugo, Joel; Nsawotebba, Andrew; Phelan, Jody E; Majwala, Robert Kaos; Tugumisirize, Didas; Nyombi, Abdunoor; Orena, Beatrice; Turyahabwe, Irene; Byabajungu, Henry; Nadunga, Diana; Musisi, Kenneth; Joloba, Moses Lutakoome; Ssengooba, Willy

The UK Antimicrobial Resistance Strategy 2013–18: A Qualitative Study of International and Domestic Policy and Action Related to Livestock and the Food Chain. (2022) Blake, Lauren J; Häsler, Barbara; Bennani, Houda; Mateus, Ana LP; Eastmure, Elizabeth; Mays, Nicholas; Stärk, Katharina DC

Linear plasmids in Klebsiella and other Enterobacteriaceae. (2022) Hawkey, Jane; Cottingham, Hugh; Tokolyi, Alex; Wick, Ryan R; Judd, Louise M; Cerdeira, Louise; de Oliveira Garcia, Doroti; Wyres, Kelly L; Holt, Kathryn E

Impact of non-pharmaceutical interventions on SARS-CoV-2 outbreaks in English care homes: a modelling study. (2022) Rosello, Alicia; Barnard, Rosanna C; Smith, David RM; Evans, Stephanie; Grimm, Fiona; Davies, Nicholas G; Centre for Mathematical Modelling of Infectious Diseases COVID-1; Deeny, Sarah R; Knight, Gwenan M; Edmunds, W John

Antibiotic Prescribing in Connection to Childbirth: An Observational Study in Two Districts in Lao PDR. (2022) Yan, Weirong; Machowska, Anna; Sihavong, Amphoy; Sychareun, Vanphanom; Chaleunvong, Kongmany; Keohavong, Bounxou; Eriksen, Jaran; Hanson, Claudia; Vongsouvath, Manivanh; Brauner, Annelie; Mayxay, Mayfong; Kounnavong, Sengchanh; Stålsby Lundborg, Cecilia

Analysis of Antimicrobial Resistance in Non-typhoidal Salmonella Collected From Pork Retail Outlets and Slaughterhouses in Vietnam Using Whole Genome Sequencing. (2022) Holohan, Niamh; Wallat, Maximilian; Hai Yen Luu, Thi; Clark, Eleanor; Truong, Duong Thi Quy; Xuan, Sinh Dang; Vu, Hue Thi Kim; Van Truong, Dung; Tran Huy, Hoang; Nguyen-Viet, Hung; Unger, Fred; Thi Thanh Dang, Son; Stabler, Richard A

Whole genome sequence analysis of Salmonella Typhi in Papua New Guinea reveals an established population of genotype 2.1.7 sensitive to antimicrobials. (2022) Dyson, Zoe Anne; Malau, Elisheba; Horwood, Paul F; Ford, Rebecca; Siba, Valentine; Yoannes, Mition; Pomat, William; Passey, Megan; Judd, Louise M; Ingle, Danielle J; Williamson, Deborah A; Dougan, Gordon; Greenhill, Andrew R; Holt, Kathryn E

Taking Opportunities, Taking Medicines: Antibiotic Use in Rural Eastern Uganda. (2022) Nayiga, Susan; Denyer Willis, Laurie; Staedke, Sarah G; Chandler, Clare Ir

Exploring barriers to guideline implementation for prescription of surgical antibiotic prophylaxis in Nigeria. (2022) Wood, Caroline E; Luedtke, Susanne; Musah, Anwar; Bammeke, Funmi; Mutiu, Bamidele; Ojewola, Rufus; Bankole, Olufemi; Ademuyiwa, Adesoji Oludotun; Ekumankama, Chibuzo Barbara; Ogunsola, Folasade; Okonji, Patrick; Kpokiri, Eneyi E; Ayibanoah, Theophilus; Aworabhi-Oki, Neni; Shallcross, Laura; Molnar, Andreea; Wiseman, Sue; Hayward, Andrew; Soriano, Delphine; Birjovanu, Georgiana; Lefevre, Carmen; Olufemi, Olajumoke; Kostkova, Patty

Mystifying medicines and maximising profit: Antibiotic distribution in community pharmacies in Thailand. (2022) Poompruek, Panoopat; Perris, Anna; Whanpuch, Phakha; Chandler, Clare IR; Sringernyuang, Luechai

A curated collection of Klebsiella metabolic models reveals variable substrate usage and gene essentiality. (2022) Hawkey, Jane; Vezina, Ben; Monk, Jonathan M; Judd, Louise M; Harshegyi, Taylor; López-Fernández, Sebastián; Rodrigues, Carla; Brisse, Sylvain; Holt, Kathryn E; Wyres, Kelly L

Antibiotics and the Biopolitics of Sex Work in Zimbabwe. (2022) Manyau, Salome; Dixon, Justin; Mutukwa, Norest; Kandiye, Faith; Palanco Lopez, Paula; MacPherson, Eleanor E; Ferrand, Rashida A; Chandler, Clare IR

Genomic diversity and antimicrobial resistance among non-typhoidal Salmonella associated with human disease in The Gambia. (2022) Darboe, Saffiatou; Bradbury, Richard S; Phelan, Jody; Kanteh, Abdoulie; Muhammad, Abdul-Khalie; Worwui, Archibald; Yang, Shangxin; Nwakanma, Davis; Perez-Sepulveda, Blanca; Kariuki, Samuel; Kwambana-Adams, Brenda; Antonio, Martin

Kaptive 2.0: updated capsule and lipopolysaccharide locus typing for the Klebsiella pneumoniae species complex. (2022) Lam, Margaret MC; Wick, Ryan R; Judd, Louise M; Holt, Kathryn E; Wyres, Kelly L

Correction to: The epidemiologic impact and cost-effectiveness of new tuberculosis vaccines on multidrug-resistant tuberculosis in India and China. (2022) Weerasuriya, Chathika K; Harris, Rebecca C; McQuaid, C Finn; Bozzani, Fiammetta; Ruan, Yunzhou; Li, Renzhong; Li, Tao; Rade, Kirankumar; Rao, Raghuram; Ginsberg, Ann M; Gomez, Gabriela B; White, Richard G

Reconciling imperatives: Clinical guidelines, antibiotic prescribing and the enactment of good care in lower-level health facilities in Tororo, Uganda. (2022) Nayiga, Susan; Denyer Willis, Laurie; Staedke, Sarah G; Chandler, Clare IR

Antibiotic prophylaxis for leptospirosis. (2022) Tabei, Kozue; Win, Tin Zar; Kitashoji, Emi; Brett-Major, David M; Edwards, Tansy; Smith, Chris; Mukadi, Patrick

How pharmaceutical and diagnostic stakeholders construct policy solutions to a public health ‘crisis’: an analysis of submissions to a United Kingdom House of Commons inquiry into antimicrobial resistance. (2022) Glover, Rebecca E; Petticrew, Mark P; Mays, Nicholas B; Thompson, Claire

Polypolish: Short-read polishing of long-read bacterial genome assemblies. (2022) Wick, Ryan R; Holt, Kathryn E

Species interactions constrain adaptation and preserve ecological stability in an experimental microbial community. (2022) Barber, Jake N; Nicholson, Luke C; Woods, Laura C; Judd, Louise M; Sezmis, Aysha L; Hawkey, Jane; Holt, Kathryn E; McDonald, Michael J

Correction to: Diversity and evolution of surface polysaccharide synthesis loci in Enterobacteriales. (2022) Holt, Kathryn E; Lassalle, Florent; Wyres, Kelly L; Wick, Ryan; Mostowy, Rafał J

A modified decision tree approach to improve the prediction and mutation discovery for drug resistance in Mycobacterium tuberculosis. (2022) Deelder, Wouter; Napier, Gary; Campino, Susana; Palla, Luigi; Phelan, Jody; Clark, Taane G

Quantifying the Relationship between Antibiotic Use in Food-Producing Animals and Antibiotic Resistance in Humans. (2022) Emes, David; Naylor, Nichola; Waage, Jeff; Knight, Gwenan

Impact of azithromycin mass drug administration on the antibiotic-resistant gut microbiome in children: a randomized, controlled trial. (2022) Pickering, Harry; Hart, John D; Burr, Sarah; Stabler, Richard; Maleta, Ken; Kalua, Khumbo; Bailey, Robin L; Holland, Martin J

Resistance to Mycobacterium tuberculosis infection among highly TB exposed South African gold miners. (2022) Chihota, Violet N; Ntshiqa, Thobani; Maenetje, Pholo; Mansukhani, Raoul; Velen, Kavindhran; Hawn, Thomas R; Wallis, Robert; Grant, Alison D; Churchyard, Gavin J; Fielding, Katherine