Year Authors/Creators Item Type Full Text

Bibliographic data only

A mathematical model for HIV and hepatitis C co-infection and its assessment from a statistical perspective. (2013) Castro Sanchez, Amparo Yovanna; Aerts, Marc; Shkedy, Ziv; Vickerman, Peter; Faggiano, Fabrizio; Salamina, Guiseppe; Hens, Niel

Epidemic prediction and control in weighted networks. (2009) Eames, Ken TD; Read, Jonathan M; Edmunds, W John

What types of contacts are important for the spread of infections?: using contact survey data to explore European mixing patterns. (2011) Melegaro, Alessia; Jit, Mark; Gay, Nigel; Zagheni, Emilio; Edmunds, W John

Public

HSV-2 serology can be predictive of HIV epidemic potential and hidden sexual risk behavior in the Middle East and North Africa. (2010) Abu-Raddad, Laith J; Schiffer, Joshua T; Ashley, Rhoda; Mumtaz, Ghina; Alsallaq, Ramzi A; Akala, Francisca Ayodeji; Semini, Iris; Riedner, Gabriele; Wilson, David

Desirable BUGS in models of infectious diseases. (2019) Auzenbergs, Megan; Correia-Gomes, Carla; Economou, Theo; Lowe, Rachel; O'Reilly, Kathleen M

Tooling-up for infectious disease transmission modelling. (2020) Baguelin, Marc; Medley, Graham F; Nightingale, Emily S; O'Reilly, Kathleen M; Rees, Eleanor M; Waterlow, Naomi R; Wagner, Moritz

Forecasting the new case detection rate of leprosy in four states of Brazil: A comparison of modelling approaches. (2017) Blok, David J; Crump, Ronald E; Sundaresh, Ram; Ndeffo-Mbah, Martial; Galvani, Alison P; Porco, Travis C; de Vlas, Sake J; Medley, Graham F; Richardus, Jan Hendrik

Building resource constraints and feasibility considerations in mathematical models for infectious disease: A systematic literature review. (2021) Bozzani, Fiammetta M; Vassall, Anna; Gomez, Gabriela B

Dengue disease outbreak definitions are implicitly variable. (2015) Brady, Oliver J; Smith, David L; Scott, Thomas W; Hay, Simon I

The distribution of Plasmodium falciparum infection durations. (2011) Bretscher, Michael T; Maire, Nicolas; Chitnis, Nakul; Felger, Ingrid; Owusu-Agyei, Seth; Smith, Tom

Does homologous reinfection drive multiple-wave influenza outbreaks? Accounting for immunodynamics in epidemiological models. (2013) Camacho, A; Cazelles, B

Potential for large outbreaks of Ebola virus disease. (2014) Camacho, A; Kucharski, AJ; Funk, S; Breman, J; Piot, P; Edmunds, WJ

A systematic review of MERS-CoV seroprevalence and RNA prevalence in dromedary camels: Implications for animal vaccination. (2019) Dighe, Amy; Jombart, Thibaut; Van Kerkhove, Maria D; Ferguson, Neil

Six challenges in measuring contact networks for use in modelling. (2014) Eames, K; Bansal, S; Frost, S; Riley, S

The impact of school holidays on the social mixing patterns of school children. (2011) Eames, Ken TD; Tilston, Natasha L; Edmunds, W John

Introduction to particle Markov-chain Monte Carlo for disease dynamics modellers. (2019) Endo, Akira; van Leeuwen, Edwin; Baguelin, Marc

Different transmission patterns in the early stages of the influenza A(H1N1)v pandemic: a comparative analysis of 12 European countries. (2011) Flasche, Stefan; Hens, Niel; Boëlle, Pierre-Yves; Mossong, Joël; van Ballegooijen, W Marijn; Nunes, Baltazar; Rizzo, Caterina; Popovici, Florin; Santa-Olalla, Patricia; Hrubá, Frantiska; Parmakova, Kremena; Baguelin, Marc; van Hoek, Albert Jan; Desenclos, Jean-Claude; Bernillon, Pascale; Cámara, Amparro Larrauri; Wallinga, Jacco; Asikainen, Tommi; White, Peter J; Edmunds, W John

Nine challenges in incorporating the dynamics of behaviour in infectious diseases models. (2014) Funk, Sebastian; Bansal, Shweta; Bauch, Chris T; Eames, Ken TD; Edmunds, W John; Galvani, Alison P; Klepac, Petra

Real-time forecasting of infectious disease dynamics with a stochastic semi-mechanistic model. (2016) Funk, Sebastian; Camacho, Anton; Kucharski, Adam J; Eggo, Rosalind M; Edmunds, W John

Choices and trade-offs in inference with infectious disease models. (2019) Funk, Sebastian; King, Aaron A

Seven challenges for modelling indirect transmission: vector-borne diseases, macroparasites and neglected tropical diseases. (2014) Hollingsworth, T Déirdre; Pulliam, Juliet RC; Funk, Sebastian; Truscott, James E; Isham, Valerie; Lloyd, Alun L

Learning from multi-model comparisons: Collaboration leads to insights, but limitations remain. (2017) Hollingsworth, TD; Medley, GF

OutbreakTools: a new platform for disease outbreak analysis using the R software. (2014) Jombart, Thibaut; Aanensen, David M; Baguelin, Marc; Birrell, Paul; Cauchemez, Simon; Camacho, Anton; Colijn, Caroline; Collins, Caitlin; Cori, Anne; Didelot, Xavier; Fraser, Christophe; Frost, Simon; Hens, Niel; Hugues, Joseph; Höhle, Michael; Opatowski, Lulla; Rambaut, Andrew; Ratmann, Oliver; Soubeyrand, Samuel; Suchard, Marc A; Wallinga, Jacco; Ypma, Rolf; Ferguson, Neil

Six challenges in the eradication of infectious diseases. (2014) Klepac, Petra; Funk, Sebastian; Hollingsworth, T Deirdre; Metcalf, C Jessica E; Hampson, Katie

Contagion! The BBC Four Pandemic - The model behind the documentary. (2018) Klepac, Petra; Kissler, Stephen; Gog, Julia

Determinants of RSV epidemiology following suppression through pandemic contact restrictions. (2022) Koltai, Mihaly; Krauer, Fabienne; Hodgson, David; van Leeuwen, Edwin; Treskova-Schwarzbach, Marina; Jit, Mark; Flasche, Stefan

Model-based estimates of transmission of respiratory syncytial virus within households. (2018) Kombe, Ivy K; Munywoki, Patrick K; Baguelin, Marc; Nokes, D James; Medley, Graham F

Challenges for modelling interventions for future pandemics. (2022) Kretzschmar, Mirjam E; Ashby, Ben; Fearon, Elizabeth; Overton, Christopher E; Panovska-Griffiths, Jasmina; Pellis, Lorenzo; Quaife, Matthew; Rozhnova, Ganna; Scarabel, Francesca; Stage, Helena B; Swallow, Ben; Thompson, Robin N; Tildesley, Michael J; Villela, Daniel

Elimination of visceral leishmaniasis in the Indian subcontinent: a comparison of predictions from three transmission models. (2017) Le Rutte, Epke A; Chapman, Lloyd AC; Coffeng, Luc E; Jervis, Sarah; Hasker, Epco C; Dwivedi, Shweta; Karthick, Morchan; Das, Aritra; Mahapatra, Tanmay; Chaudhuri, Indrajit; Boelaert, Marleen C; Medley, Graham F; Srikantiah, Sridhar; Hollingsworth, T Deirdre; de Vlas, Sake J

Modelling multi-site transmission of the human papillomavirus and its impact on vaccination effectiveness. (2017) Lemieux-Mellouki, P; Drolet, M; Jit, M; Gingras, G; Brisson, M

Seven challenges for model-driven data collection in experimental and observational studies. (2014) Lessler, J; Edmunds, WJ; Halloran, ME; Hollingsworth, TD; Lloyd, AL

The efficacy of oral azithromycin in clearing ocular chlamydia: mathematical modeling from a community-randomized trachoma trial. (2014) Liu, Fengchen; Porco, Travis C; Mkocha, Harran A; Muñoz, Beatriz; Ray, Kathryn J; Bailey, Robin L; Lietman, Thomas M; West, Sheila K

Nine challenges in modelling the emergence of novel pathogens. (2014) Lloyd-Smith, James O; Funk, Sebastian; McLean, Angela R; Riley, Steven; Wood, James LN

Estimating age-mixing patterns relevant for the transmission of airborne infections. (2019) McCreesh, Nicky; Morrow, Carl; Middelkoop, Keren; Wood, Robin; White, Richard G

Correlations between stochastic epidemics in two interacting populations. (2019) Meakin, Sophie R; Keeling, Matt J

Challenges in evaluating risks and policy options around endemic establishment or elimination of novel pathogens. (2021) Metcalf, C Jessica E; Andriamandimby, Soa Fy; Baker, Rachel E; Glennon, Emma E; Hampson, Katie; Hollingsworth, T Deirdre; Klepac, Petra; Wesolowski, Amy

Seven challenges in modeling vaccine preventable diseases. (2014) Metcalf, CJE; Andreasen, V; Bjørnstad, ON; Eames, K; Edmunds, WJ; Funk, S; Hollingsworth, TD; Lessler, J; Viboud, C; Grenfell, BT

Five challenges in evolution and infectious diseases. (2014) Metcalf, CJE; Birger, RB; Funk, S; Kouyos, RD; Lloyd-Smith, JO; Jansen, VAA

Six challenges in modelling for public health policy. (2014) Metcalf, CJE; Edmunds, WJ; Lessler, J

Approximate Bayesian Computation for infectious disease modelling. (2019) Minter, Amanda; Retkute, Renata

Comparing the impact of increasing condom use or HIV pre-exposure prophylaxis (PrEP) use among female sex workers. (2015) Mukandavire, Z; Mitchell, KM; Vickerman, P

Comparing the impact of increasing condom use or HIV pre-exposure prophylaxis (PrEP) use among female sex workers. (2015) Mukandavire, Zindoga; Mitchell, Kate M; Vickerman, Peter

Phylodynamic analysis of HIV-1 subtypes B, C and CRF 02_AG in Senegal. (2020) Nascimento, Fabrícia F; Baral, Stefan; Geidelberg, Lily; Mukandavire, Christinah; Schwartz, Sheree R; Turpin, Gnilane; Turpin, Nguissali; Diouf, Daouda; Diouf, Nafissatou Leye; Coly, Karleen; Kane, Coumba Toure; Ndour, Cheikh; Vickerman, Peter; Boily, Marie-Claude; Volz, Erik M

Eight challenges for network epidemic models. (2014) Pellis, Lorenzo; Ball, Frank; Bansal, Shweta; Eames, Ken; House, Thomas; Isham, Valerie; Trapman, Pieter

Considering equity in priority setting using transmission models: Recommendations and data needs. (2022) Quaife, M; Medley, GF; Jit, M; Drake, T; Asaria, M; van Baal, P; Baltussen, R; Bollinger, L; Bozzani, F; Brady, O; Broekhuizen, H; Chalkidou, K; Chi, Y-L; Dowdy, DW; Griffin, S; Haghparast-Bidgoli, H; Hallett, T; Hauck, K; Hollingsworth, TD; McQuaid, CF; Menzies, NA; Merritt, MW; Mirelman, A; Morton, A; Ruiz, FJ; Siapka, M; Skordis, J; Tediosi, F; Walker, P; White, RG; Winskill, P; Vassall, A; Gomez, GB

Climate change and communicable diseases in the Gulf Cooperation Council (GCC) countries. (2023) Rawson, Thomas; Doohan, Patrick; Hauck, Katharina; Murray, Kris A; Ferguson, Neil

Five challenges for spatial epidemic models. (2014) Riley, Steven; Eames, Ken; Isham, Valerie; Mollison, Denis; Trapman, Pieter

Control of Ebola virus disease outbreaks: Comparison of health care worker-targeted and community vaccination strategies. (2019) Robert, Alexis; Camacho, Anton; Edmunds, W John; Baguelin, Marc; Muyembe Tamfum, Jean-Jacques; Rosello, Alicia; Kéïta, Sakoba; Eggo, Rosalind M

Data-driven models to predict the elimination of sleeping sickness in former Equateur province of DRC. (2017) Rock, KS; Pandey, A; Ndeffo-Mbah, ML; Atkins, KE; Lumbala, C; Galvani, A; Keeling, MJ

The social contact hypothesis under the assumption of endemic equilibrium: Elucidating the transmission potential of VZV in Europe. (2015) Santermans, E; Goeyvaerts, N; Melegaro, A; Edmunds, WJ; Faes, C; Aerts, M; Beutels, P; Hens, N

Modelling HIV in the injecting drug user population and the male homosexual population in a developed country context. (2012) Sutton, AJ; House, T; Hope, VD; Ncube, F; Wiessing, L; Kretzschmar, M

Social mixing patterns relevant to infectious diseases spread by close contact in urban Blantyre, Malawi. (2022) Thindwa, Deus; Jambo, Kondwani C; Ojal, John; MacPherson, Peter; Dennis Phiri, Mphatso; Pinsent, Amy; Khundi, McEwen; Chiume, Lingstone; Gallagher, Katherine E; Heyderman, Robert S; Corbett, Elizabeth L; French, Neil; Flasche, Stefan

Improved inference of time-varying reproduction numbers during infectious disease outbreaks. (2019) Thompson, RN; Stockwin, JE; van Gaalen, RD; Polonsky, JA; Kamvar, ZN; Demarsh, PA; Dahlqwist, E; Li, S; Miguel, E; Jombart, T; Lessler, J; Cauchemez, S; Cori, A

Modelling the elimination of river blindness using long-term epidemiological and programmatic data from Mali and Senegal. (2017) Walker, Martin; Stolk, Wilma A; Dixon, Matthew A; Bottomley, Christian; Diawara, Lamine; Traoré, Mamadou O; de Vlas, Sake J; Basáñez, María-Gloria

Competition between RSV and influenza: Limits of modelling inference from surveillance data. (2021) Waterlow, Naomi R; Flasche, Stefan; Minter, Amanda; Eggo, Rosalind M

Five challenges in modelling interacting strain dynamics. (2014) Wikramaratna, Paul S; Kucharski, Adam; Gupta, Sunetra; Andreasen, Viggo; McLean, Angela R; Gog, Julia R

Clustering of contacts relevant to the spread of infectious disease. (2016) Xiao, Xiong; van Hoek, Albert Jan; Kenward, Michael G; Melegaro, Alessia; Jit, Mark

The impact of stratified immunity on the transmission dynamics of influenza. (2017) Yuan, Hsiang-Yu; Baguelin, Marc; Kwok, Kin O; Arinaminpathy, Nimalan; van Leeuwen, Edwin; Riley, Steven

Understanding MRSA clonal competition within a UK hospital; the possible importance of density dependence. (2021) de Vos, Anneke S; de Vlas, Sake J; Lindsay, Jodi A; Kretzschmar, Mirjam EE; Knight, Gwenan M

Identifying human encounters that shape the transmission of Streptococcus pneumoniae and other acute respiratory infections. (2018) le Polain de Waroux, Olivier; Flasche, Stefan; Kucharski, Adam J; Langendorf, Celine; Ndazima, Donny; Mwanga-Amumpaire, Juliet; Grais, Rebecca F; Cohuet, Sandra; Edmunds, W John

Social contacts and other risk factors for respiratory infections among internally displaced people in Somaliland. (2022) van Zandvoort, Kevin; Bobe, Mohamed Omer; Hassan, Abdirahman Ibrahim; Abdi, Mohamed Ismail; Ahmed, Mohammed Saed; Soleman, Saeed Mohamood; Warsame, Mohamed Yusuf; Wais, Muna Awil; Diggle, Emma; McGowan, Catherine R; Satzke, Catherine; Mulholland, Kim; Egeh, Mohamed Mohamoud; Hassan, Mukhtar Muhumed; Hergeeye, Mohamed Abdi; Eggo, Rosalind M; Checchi, Francesco; Flasche, Stefan