Items where Faculty or Department is "Dept of Pathogen Molecular Biology (-2019)"

LSHTM Organisational Structure (57264)

Faculty of Infectious and Tropical Diseases (18516)

Department of Infection Biology (5552)

Dept of Pathogen Molecular Biology (-2019) (1192) Month Authors/Creators Item Type Full Text

December 2017

Analyses of Tissue Culture Adaptation of Human Herpesvirus-6A by Whole Genome Deep Sequencing Redefines the Reference Sequence and Identifies Virus Entry Complex Changes. (2017) Tweedy, Joshua G; Escriva, Eric; Topf, Maya; Gompels, Ursula A

Convergent evolution and topologically disruptive polymorphisms among multidrug-resistant tuberculosis in Peru. (2017) Grandjean, Louis; Gilman, Robert H; Iwamoto, Tomatada; Köser, Claudio U; Coronel, Jorge; Zimic, Mirko; Török, M Estee; Ayabina, Diepreye; Kendall, Michelle; Fraser, Christophe; Harris, Simon; Parkhill, Julian; Peacock, Sharon J; Moore, David AJ; Colijn, Caroline

Within-host evolution of Enterococcus faecium during longitudinal carriage and transition to bloodstream infection in immunocompromised patients. (2017) Moradigaravand, Danesh; Gouliouris, Theodore; Blane, Beth; Naydenova, Plamena; Ludden, Catherine; Crawley, Charles; Brown, Nicholas M; Török, M Estée; Parkhill, Julian; Peacock, Sharon J

Genome-Based Analysis of Enterococcus faecium Bacteremia Associated with Recurrent and Mixed-Strain Infection. (2017) Raven, Kathy E; Gouliouris, Theodore; Parkhill, Julian; Peacock, Sharon J

Comparison of Salmonella enterica Serovars Typhi and Typhimurium Reveals Typhoidal Serovar-Specific Responses to Bile. (2017) Johnson, Rebecca; Ravenhall, Matt; Pickard, Derek; Dougan, Gordon; Byrne, Alexander; Frankel, Gad

November 2017

Citrobacter rodentium Relies on Commensals for Colonization of the Colonic Mucosa. (2017) Mullineaux-Sanders, Caroline; Collins, James W; Ruano-Gallego, David; Levy, Maayan; Pevsner-Fischer, Meirav; Glegola-Madejska, Izabela T; Sågfors, Agnes M; Wong, Joshua LC; Elinav, Eran; Crepin, Valerie F; Frankel, Gad

A multistage antimalarial targets the plasmepsins IX and X essential for invasion and egress. (2017) Pino, P; Caldelari, R; Mukherjee, B; Vahokoski, J; Klages, N; Maco, B; Collins, CR; Blackman, MJ; Kursula, I; Heussler, V; Brochet, M; Soldati-Favre, D

Interaction between a Unique Minor Protein and a Major Capsid Protein of Bluetongue Virus Controls Virus Infectivity. (2017) Matsuo, Eiko; Yamazaki, Kiyoshi; Tsuruta, Hiroki; Roy, Polly

What Is Resistance? Impact of Phenotypic versus Molecular Drug Resistance Testing on Therapy for Multi- and Extensively Drug-Resistant Tuberculosis. (2017) Heyckendorf, Jan; Andres, Sönke; Köser, Claudio U; Olaru, Ioana D; Schön, Thomas; Sturegård, Erik; Beckert, Patrick; Schleusener, Viola; Kohl, Thomas A; Hillemann, Doris; Moradigaravand, Danesh; Parkhill, Julian; Peacock, Sharon J; Niemann, Stefan; Lange, Christoph; Merker, Matthias

Corrigendum to "Genetic diversity of next generation antimalarial targets: A baseline for drug resistance surveillance programmes" [Int. J. Parasitol. Drugs and Drug Resist. 7 (2017) 174-180]. (2017) Gomes, Ana Rita; Ravenhall, Matt; Benavente, Ernest Diez; Talman, Arthur; Sutherland, Colin; Roper, Cally; Clark, Taane G; Campino, Susana

Hierarchical protein targeting and secretion is controlled by an affinity switch in the type III secretion system of enteropathogenic Escherichia coli. (2017) Portaliou, Athina G; Tsolis, Konstantinos C; Loos, Maria S; Balabanidou, Vassileia; Rayo, Josep; Tsirigotaki, Alexandra; Crepin, Valerie F; Frankel, Gad; Kalodimos, Charalampos G; Karamanou, Spyridoula; Economou, Anastassios

October 2017

Frequent Undetected Ward-Based Methicillin-Resistant Staphylococcus aureus Transmission Linked to Patient Sharing Between Hospitals. (2017) Tosas Auguet, Olga; Stabler, Richard A; Betley, Jason; Preston, Mark D; Dhaliwal, Mandeep; Gaunt, Michael; Ioannou, Avgousta; Desai, Nergish; Karadag, Tacim; Batra, Rahul; Otter, Jonathan A; Marbach, Helene; Clark, Taane G; Edgeworth, Jonathan D

Longitudinal genomic surveillance of MRSA in the UK reveals transmission patterns in hospitals and the community. (2017) Coll, Francesc; Harrison, Ewan M; Toleman, Michelle S; Reuter, Sandra; Raven, Kathy E; Blane, Beth; Palmer, Beverley; Kappeler, A Ruth M; Brown, Nicholas M; Török, M Estée; Parkhill, Julian; Peacock, Sharon J

Investigation of a Cluster of Sequence Type 22 Methicillin-Resistant Staphylococcus aureus Transmission in a Community Setting. (2017) Toleman, Michelle S; Watkins, Emmeline R; Williams, Tom; Blane, Beth; Sadler, Belinda; Harrison, Ewan M; Coll, Francesc; Parkhill, Julian; Nazareth, Bernadette; Brown, Nicholas M; Peacock, Sharon J

Citrobacter rodentium Subverts ATP Flux and Cholesterol Homeostasis in Intestinal Epithelial Cells In Vivo. (2017) Berger, Cedric N; Crepin, Valerie F; Roumeliotis, Theodoros I; Wright, James C; Carson, Danielle; Pevsner-Fischer, Meirav; Furniss, R Christopher D; Dougan, Gordon; Dori-Bachash, Mally; Yu, Lu; Clements, Abigail; Collins, James W; Elinav, Eran; Larrouy-Maumus, Gerald J; Choudhary, Jyoti S; Frankel, Gad

Role of Alanine Racemase Mutations in Mycobacterium tuberculosis d-Cycloserine Resistance. (2017) Nakatani, Yoshio; Opel-Reading, Helen K; Merker, Matthias; Machado, Diana; Andres, Sönke; Kumar, S Siva; Moradigaravand, Danesh; Coll, Francesc; Perdigão, João; Portugal, Isabel; Schön, Thomas; Nair, Dina; Devi, KR Uma; Kohl, Thomas A; Beckert, Patrick; Clark, Taane G; Maphalala, Gugu; Khumalo, Derrick; Diel, Roland; Klaos, Kadri; Aung, Htin Lin; Cook, Gregory M; Parkhill, Julian; Peacock, Sharon J; Swaminathan, Soumya; Viveiros, Miguel; Niemann, Stefan; Krause, Kurt L; Köser, Claudio U

September 2017

Host Transcription Profile in Nasal Epithelium and Whole Blood of Hospitalized Children Under 2 Years of Age With Respiratory Syncytial Virus Infection. (2017) Do, Lien Anh Ha; Pellet, Johann; van Doorn, H Rogier; Tran, Anh Tuan; Nguyen, Bach Hue; Tran, Thi Thu Loan; Tran, Quynh Huong; Vo, Quoc Bao; Tran Dac, Nguyen Anh; Trinh, Hong Nhien; Nguyen, Thi Thanh Hai; Le Binh, Bao Tinh; Nguyen, Huu Mai Khanh; Nguyen, Minh Tien; Thai, Quang Tung; Vo, Thanh Vu; Ngo, Ngoc Quang Minh; Dang, Thi Kim Huyen; Cao, Ngoc Huong; Tran, Thu Van; Ho, Lu Viet; De Meulder, Bertrand; Auffray, Charles; Hofstra, Jorrit-Jan; Farrar, Jeremy; Bryant, Juliet E; de Jong, Menno; Hibberd, Martin L

Parental perceptions of childhood seasonal influenza vaccination in Singapore: A cross-sectional survey. (2017) Low, MSF; Tan, H; Hartman, M; Tam, CC; Hoo, C; Lim, J; Chiow, S; Lee, S; Thng, R; Cai, M; Tan, Y; Lock, J

AMR Surveillance in low and middle-income settings - A roadmap for participation in the Global Antimicrobial Surveillance System (GLASS). (2017) Seale, Anna C; Gordon, N Claire; Islam, Jasmin; Peacock, Sharon J; Scott, J Anthony G

Being an 'adolescent': The consequences of gendered risks for young people in rural Uganda. (2017) Bernays, Sarah; Bukenya, Dominic; Thompson, Claire; Ssembajja, Fatuma; Seeley, Janet

Use of whole genome deep sequencing to define emerging minority variants in virus envelope genes in herpesvirus treated with novel antimicrobial K21. (2017) Tweedy, Joshua G; Prusty, Bhupesh K; Gompels, Ursula A

Comparative Genomic Analysis and In Vivo Modeling of Streptococcus pneumoniae ST3081 and ST618 Isolates Reveal Key Genetic and Phenotypic Differences Contributing to Clonal Replacement of Serotype 1 in The Gambia. (2017) Bricio-Moreno, Laura; Ebruke, Chinelo; Chaguza, Chrispin; Cornick, Jennifer; Kwambana-Adams, Brenda; Yang, Marie; Mackenzie, Grant; Wren, Brendan W; Everett, Dean; Antonio, Martin; Kadioglu, Aras

Whole genome sequencing of ESBL-producing Escherichia coli isolated from patients, farm waste and canals in Thailand. (2017) Runcharoen, Chakkaphan; Raven, Kathy E; Reuter, Sandra; Kallonen, Teemu; Paksanont, Suporn; Thammachote, Jeeranan; Anun, Suthatip; Blane, Beth; Parkhill, Julian; Peacock, Sharon J; Chantratita, Narisara

Evaluation of the Luminex xTAG Respiratory Viral Panel FAST v2 assay for detection of multiple respiratory viral pathogens in nasal and throat swabs in Vietnam. (2017) Thi Ty Hang, Vu; Thi Han Ny, Nguyen; My Phuc, Tran; Thi Thanh Tam, Pham; Thao Huong, Dang; Dang Trung Nghia, Ho; Tran Anh Vu, Nguyen; Thi Hong Phuong, Pham; Van Xang, Nguyen; Dong, Nguyen; Nhu Hiep, Pham; Van Hung, Nguyen; Tinh Hien, Tran; Rabaa, Maia; Thwaites, Guy E; Baker, Stephen; Van Tan, Le; van Doorn, H Rogier; VIZIONS consortium

Evolution of mobile genetic element composition in an epidemic methicillin-resistant Staphylococcus aureus: temporal changes correlated with frequent loss and gain events. (2017) Jamrozy, Dorota; Coll, Francesc; Mather, Alison E; Harris, Simon R; Harrison, Ewan M; MacGowan, Alasdair; Karas, Andreas; Elston, Tony; Estée Török, M; Parkhill, Julian; Peacock, Sharon J

August 2017

Population genetic structure and genomic divergence in Plasmodium knowlesi. (2017) Divis, P

The Enterohemorrhagic Escherichia coli Effector EspW Triggers Actin Remodeling in a Rac1-Dependent Manner. (2017) Sandu, Pamela; Crepin, Valerie F; Drechsler, Hauke; McAinsh, Andrew D; Frankel, Gad; Berger, Cedric N

Community outbreaks of group A Streptococcus revealed by genome sequencing. (2017) Turner, Claire E; Bedford, Luke; Brown, Nicholas M; Judge, Kim; Török, M Estée; Parkhill, Julian; Peacock, Sharon J

Delayed effects of transcriptional responses in Mycobacterium tuberculosis exposed to nitric oxide suggest other mechanisms involved in survival. (2017) Cortes, Teresa; Schubert, Olga T; Banaei-Esfahani, Amir; Collins, Ben C; Aebersold, Ruedi; Young, Douglas B

Rapid replacement by non-vaccine pneumococcal serotypes may mitigate the impact of the pneumococcal conjugate vaccine on nasopharyngeal bacterial ecology. (2017) Kwambana-Adams, Brenda; Hanson, Blake; Worwui, Archibald; Agbla, Schadrac; Foster-Nyarko, Ebenezer; Ceesay, Fatima; Ebruke, Chinelo; Egere, Uzochukwu; Zhou, Yanjiao; Ndukum, Maze; Sodergren, Erica; Barer, Michael; Adegbola, Richard; Weinstock, George; Antonio, Martin

Genomic surveillance reveals low prevalence of livestock-associated methicillin-resistant Staphylococcus aureus in the East of England. (2017) Harrison, Ewan M; Coll, Francesc; Toleman, Michelle S; Blane, Beth; Brown, Nicholas M; Török, M Estee; Parkhill, Julian; Peacock, Sharon J

Clonal differences in Staphylococcus aureus bacteraemia-associated mortality. (2017) Recker, Mario; Laabei, Maisem; Toleman, Michelle S; Reuter, Sandra; Saunderson, Rebecca B; Blane, Beth; Török, M Estee; Ouadi, Khadija; Stevens, Emily; Yokoyama, Maho; Steventon, Joseph; Thompson, Luke; Milne, Gregory; Bayliss, Sion; Bacon, Leann; Peacock, Sharon J; Massey, Ruth C

A current perspective on antimicrobial resistance in Southeast Asia. (2017) Zellweger, Raphaël M; Carrique-Mas, Juan; Limmathurotsakul, Direk; Day, Nicholas PJ; Thwaites, Guy E; Baker, Stephen; Southeast Asia Antimicrobial Resistance Network

Single nucleotide polymorphisms in efflux pumps genes in extensively drug resistant Mycobacterium tuberculosis isolates from Pakistan. (2017) Kanji, A; Hasan, R; Ali, A; Zaver, A; Zhang, Y; Imtiaz, K; Shi, W; Clark, TG; McNerney, R; Phelan, J; Rao, S; Shafiq, S; Hasan, Z

Assessing gut microbiota perturbations during the early phase of infectious diarrhea in Vietnamese children. (2017) The, Hao Chung; Florez de Sessions, Paola; Jie, Song; Pham Thanh, Duy; Thompson, Corinne N; Nguyen Ngoc Minh, Chau; Chu, Collins Wenhan; Tran, Tuan-Anh; Thomson, Nicholas R; Thwaites, Guy E; Rabaa, Maia A; Hibberd, Martin; Baker, Stephen

July 2017

Longitudinal genomic surveillance of multidrug-resistant Escherichia coli carriage in a long-term care facility in the United Kingdom. (2017) Brodrick, Hayley J; Raven, Kathy E; Kallonen, Teemu; Jamrozy, Dorota; Blane, Beth; Brown, Nicholas M; Martin, Veronique; Török, M Estée; Parkhill, Julian; Peacock, Sharon J

Multiplication rate variation in the human malaria parasite Plasmodium falciparum. (2017) Murray, Lee; Stewart, Lindsay B; Tarr, Sarah J; Ahouidi, Ambroise D; Diakite, Mahamadou; Amambua-Ngwa, Alfred; Conway, David J

Systematic longitudinal survey of invasive Escherichia coli in England demonstrates a stable population structure only transiently disturbed by the emergence of ST131. (2017) Kallonen, Teemu; Brodrick, Hayley J; Harris, Simon R; Corander, Jukka; Brown, Nicholas M; Martin, Veronique; Peacock, Sharon J; Parkhill, Julian

Ornithine uptake and the modulation of drug sensitivity in Trypanosoma brucei. (2017) Macedo, Juan P; Currier, Rachel B; Wirdnam, Corina; Horn, David; Alsford, Sam; Rentsch, Doris

Evolution of the Staphylococcus argenteus ST2250 Clone in Northeastern Thailand Is Linked with the Acquisition of Livestock-Associated Staphylococcal Genes. (2017) Moradigaravand, Danesh; Jamrozy, Dorota; Mostowy, Rafal; Anderson, Annaliesa; Nickerson, Emma K; Thaipadungpanit, Janjira; Wuthiekanun, Vanaporn; Limmathurotsakul, Direk; Tandhavanant, Sarunporn; Wikraiphat, Chanthiwa; Wongsuvan, Gumphol; Teerawattanasook, Nittaya; Jutrakul, Yaowaruk; Srisurat, Nuttiya; Chaimanee, Prajuab; Eoin West, T; Blane, Beth; Parkhill, Julian; Chantratita, Narisara; Peacock, Sharon J

Sharing of carbapenemase-encoding plasmids between Enterobacteriaceae in UK sewage uncovered by MinION sequencing. (2017) Ludden, Catherine; Reuter, Sandra; Judge, Kim; Gouliouris, Theodore; Blane, Beth; Coll, Francesc; Naydenova, Plamena; Hunt, Martin; Tracey, Alan; Hopkins, Katie L; Brown, Nicholas M; Woodford, Neil; Parkhill, Julian; Peacock, Sharon J

June 2017

Rotavirus Genomic RNA Complex Forms via Specific RNA-RNA Interactions: Disruption of RNA Complex Inhibits Virus Infectivity. (2017) Fajardo, Teodoro; Sung, Po-Yu; Celma, Cristina C; Roy, Polly

Gastrointestinal tract involvement in melioidosis. (2017) Teparrukkul, Prapit; Kongkasame, Worrarat; Chitsaeng, Songla; Wongsuwan, Gumphol; Wuthiekanun, Vanaporn; Peacock, Sharon J; Limmathurotsakul, Direk

Bluetongue virus structure and assembly. (2017) Roy, P

Evidence on public health interventions in humanitarian crises. (2017) Blanchet, K; Ramesh, A; Frison, S; Warren, E; Hossain, M; Smith, J; Knight, A; Post, N; Lewis, C; Woodward, A; Dahab, M; Ruby, A; Sistenich, V; Pantuliano, S; Roberts, B

Human parechovirus cluster in the UK, 8 May-2 August 2016-sequence analysis. (2017) Holmes, CW; Rahman, S; Allen, DJ; Bandi, S; Tang, JW

May 2017

Genetic association study of exfoliation syndrome identifies a protective rare variant at LOXL1 and five new susceptibility loci. (2017) Aung, Tin; Ozaki, Mineo; Lee, Mei Chin; Schlötzer-Schrehardt, Ursula; Thorleifsson, Gudmar; Mizoguchi, Takanori; Igo, Robert P; Haripriya, Aravind; Williams, Susan E; Astakhov, Yury S; Orr, Andrew C; Burdon, Kathryn P; Nakano, Satoko; Mori, Kazuhiko; Abu-Amero, Khaled; Hauser, Michael; Li, Zheng; Prakadeeswari, Gopalakrishnan; Bailey, Jessica N Cooke; Cherecheanu, Alina Popa; Kang, Jae H; Nelson, Sarah; Hayashi, Ken; Manabe, Shin-Ichi; Kazama, Shigeyasu; Zarnowski, Tomasz; Inoue, Kenji; Irkec, Murat; Coca-Prados, Miguel; Sugiyama, Kazuhisa; Järvelä, Irma; Schlottmann, Patricio; Lerner, S Fabian; Lamari, Hasnaa; Nilgün, Yildirim; Bikbov, Mukharram; Park, Ki Ho; Cha, Soon Cheol; Yamashiro, Kenji; Zenteno, Juan C; Jonas, Jost B; Kumar, Rajesh S; Perera, Shamira A; Chan, Anita SY; Kobakhidze, Nino; George, Ronnie; Vijaya, Lingam; Do, Tan; Edward, Deepak P; de Juan Marcos, Lourdes; Pakravan, Mohammad; Moghimi, Sasan; Ideta, Ryuichi; Bach-Holm, Daniella; Kappelgaard, Per; Wirostko, Barbara; Thomas, Samuel; Gaston, Daniel; Bedard, Karen; Greer, Wenda L; Yang, Zhenglin; Chen, Xueyi; Huang, Lulin; Sang, Jinghong; Jia, Hongyan; Jia, Liyun; Qiao, Chunyan; Zhang, Hui; Liu, Xuyang; Zhao, Bowen; Wang, Ya-Xing; Xu, Liang; Leruez, Stéphanie; Reynier, Pascal; Chichua, George; Tabagari, Sergo; Uebe, Steffen; Zenkel, Matthias; Berner, Daniel; Mossböck, Georg; Weisschuh, Nicole; Hoja, Ursula; Welge-Luessen, Ulrich-Christoph; Mardin, Christian; Founti, Panayiota; Chatzikyriakidou, Anthi; Pappas, Theofanis; Anastasopoulos, Eleftherios; Lambropoulos, Alexandros; Ghosh, Arkasubhra; Shetty, Rohit; Porporato, Natalia; Saravanan, Vijayan; Venkatesh, Rengaraj; Shivkumar, Chandrashekaran; Kalpana, Narendran; Sarangapani, Sripriya; Kanavi, Mozhgan R; Beni, Afsaneh Naderi; Yazdani, Shahin; Lashay, Alireza; Naderifar, Homa; Khatibi, Nassim; Fea, Antonio; Lavia, Carlo; Dallorto, Laura; Rolle, Teresa; Frezzotti, Paolo; Paoli, Daniela; Salvi, Erika; Manunta, Paolo; Mori, Yosai; Miyata, Kazunori; Higashide, Tomomi; Chihara, Etsuo; Ishiko, Satoshi; Yoshida, Akitoshi; Yanagi, Masahide; Kiuchi, Yoshiaki; Ohashi, Tsutomu; Sakurai, Toshiya; Sugimoto, Takako; Chuman, Hideki; Aihara, Makoto; Inatani, Masaru; Miyake, Masahiro; Gotoh, Norimoto; Matsuda, Fumihiko; Yoshimura, Nagahisa; Ikeda, Yoko; Ueno, Morio; Sotozono, Chie; Jeoung, Jin Wook; Sagong, Min; Park, Kyu Hyung; Ahn, Jeeyun; Cruz-Aguilar, Marisa; Ezzouhairi, Sidi M; Rafei, Abderrahman; Chong, Yaan Fun; Ng, Xiao Yu; Goh, Shuang Ru; Chen, Yueming; Yong, Victor HK; Khan, Muhammad Imran; Olawoye, Olusola O; Ashaye, Adeyinka O; Ugbede, Idakwo; Onakoya, Adeola; Kizor-Akaraiwe, Nkiru; Teekhasaenee, Chaiwat; Suwan, Yanin; Supakontanasan, Wasu; Okeke, Suhanya; Uche, Nkechi J; Asimadu, Ifeoma; Ayub, Humaira; Akhtar, Farah; Kosior-Jarecka, Ewa; Lukasik, Urszula; Lischinsky, Ignacio; Castro, Vania; Grossmann, Rodolfo Perez; Sunaric Megevand, Gordana; Roy, Sylvain; Dervan, Edward; Silke, Eoin; Rao, Aparna; Sahay, Priti; Fornero, Pablo; Cuello, Osvaldo; Sivori, Delia; Zompa, Tamara; Mills, Richard A; Souzeau, Emmanuelle; Mitchell, Paul; Wang, Jie Jin; Hewitt, Alex W; Coote, Michael; Crowston, Jonathan G; Astakhov, Sergei Y; Akopov, Eugeny L; Emelyanov, Anton; Vysochinskaya, Vera; Kazakbaeva, Gyulli; Fayzrakhmanov, Rinat; Al-Obeidan, Saleh A; Owaidhah, Ohoud; Aljasim, Leyla Ali; Chowbay, Balram; Foo, Jia Nee; Soh, Raphael Q; Sim, Kar Seng; Xie, Zhicheng; Cheong, Augustine WO; Mok, Shi Qi; Soo, Hui Meng; Chen, Xiao Yin; Peh, Su Qin; Heng, Khai Koon; Husain, Rahat; Ho, Su-Ling; Hillmer, Axel M; Cheng, Ching-Yu; Escudero-Domínguez, Francisco A; González-Sarmiento, Rogelio; Martinon-Torres, Frederico; Salas, Antonio; Pathanapitoon, Kessara; Hansapinyo, Linda; Wanichwecharugruang, Boonsong; Kitnarong, Naris; Sakuntabhai, Anavaj; Nguyn, Hip X; Nguyn, Giang TT; Nguyn, Trình V; Zenz, Werner; Binder, Alexander; Klobassa, Daniela S; Hibberd, Martin L; Davila, Sonia; Herms, Stefan; Nöthen, Markus M; Moebus, Susanne; Rautenbach, Robyn M; Ziskind, Ari; Carmichael, Trevor R; Ramsay, Michele; Álvarez, Lydia; García, Montserrat; González-Iglesias, Héctor; Rodríguez-Calvo, Pedro P; Fernández-Vega Cueto, Luis; Oguz, Çilingir; Tamcelik, Nevbahar; Atalay, Eray; Batu, Bilge; Aktas, Dilek; Kasım, Burcu; Wilson, M Roy; Coleman, Anne L; Liu, Yutao; Challa, Pratap; Herndon, Leon; Kuchtey, Rachel W; Kuchtey, John; Curtin, Karen; Chaya, Craig J; Crandall, Alan; Zangwill, Linda M; Wong, Tien Yin; Nakano, Masakazu; Kinoshita, Shigeru; den Hollander, Anneke I; Vesti, Eija; Fingert, John H; Lee, Richard K; Sit, Arthur J; Shingleton, Bradford J; Wang, Ningli; Cusi, Daniele; Qamar, Raheel; Kraft, Peter; Pericak-Vance, Margaret A; Raychaudhuri, Soumya; Heegaard, Steffen; Kivelä, Tero; Reis, André; Kruse, Friedrich E; Weinreb, Robert N; Pasquale, Louis R; Haines, Jonathan L; Thorsteinsdottir, Unnur; Jonasson, Fridbert; Allingham, R Rand; Milea, Dan; Ritch, Robert; Kubota, Toshiaki; Tashiro, Kei; Vithana, Eranga N; Micheal, Shazia; Topouzis, Fotis; Craig, Jamie E; Dubina, Michael; Sundaresan, Periasamy; Stefansson, Kari; Wiggs, Janey L; Pasutto, Francesca; Khor, Chiea Chuen

Outbreak of Zika virus infection in Singapore: an epidemiological, entomological, virological, and clinical analysis. (2017) Singapore Zika Study Group

Seasonal vaccination against malaria: a potential use for an imperfect malaria vaccine. (2017) Greenwood, Brian; Dicko, Alassane; Sagara, Issaka; Zongo, Issaka; Tinto, Halidou; Cairns, Matthew; Kuepfer, Irene; Milligan, Paul; Ouedraogo, Jean-Bosco; Doumbo, Ogobara; Chandramohan, Daniel

April 2017

EthA/R-Independent Killing of Mycobacterium tuberculosis by Ethionamide. (2017) Ang, Michelle LT; Zainul Rahim, Siti Z; de Sessions, Paola Florez; Lin, Wenwei; Koh, Vanessa; Pethe, Kevin; Hibberd, Martin L; Alonso, Sylvie

Exploiting induced pluripotent stem cell-derived macrophages to unravel host factors influencing Chlamydia trachomatis pathogenesis. (2017) Yeung, Amy TY; Hale, Christine; Lee, Amy H; Gill, Erin E; Bushell, Wendy; Parry-Smith, David; Goulding, David; Pickard, Derek; Roumeliotis, Theodoros; Choudhary, Jyoti; Thomson, Nick; Skarnes, William C; Dougan, Gordon; Hancock, Robert EW

A universal genome sequencing method for rotavirus A from human fecal samples which identifies segment reassortment and multi-genotype mixed infection. (2017) Dung, Tran Thi Ngoc; Duy, Pham Thanh; Sessions, October M; Sangumathi, Uma K; Phat, Voong Vinh; Tam, Pham Thi Thanh; To, Nguyen Thi Nguyen; Phuc, Tran My; Hong Chau, Tran Thi; Chau, Nguyen Ngoc Minh; Minh, Ngoc Nguyen; Thwaites, Guy E; Rabaa, Maia A; Baker, Stephen

Detection of potentially novel paramyxovirus and coronavirus viral RNA in bats and rats in the Mekong Delta region of southern Viet Nam. (2017) Berto, A; Anh, PH; Carrique-Mas, JJ; Simmonds, P; Van Cuong, N; Tue, NT; Van Dung, N; Woolhouse, ME; Smith, I; Marsh, GA; Bryant, JE; Thwaites, GE; Baker, S; Rabaa, MA; VIZIONS consortium

Current challenges and possible solutions to improve access to care and treatment for hepatitis C infection in Vietnam: a systematic review. (2017) Berto, Alessandra; Day, Jeremy; Van Vinh Chau, Nguyen; Thwaites, Guy E; My, Ngoc Nghiem; Baker, Stephen; Darton, Thomas C

Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for the identification of Burkholderia pseudomallei from Asia and Australia and differentiation between Burkholderia species. (2017) Suttisunhakul, Vichaya; Pumpuang, Apinya; Ekchariyawat, Peeraya; Wuthiekanun, Vanaporn; Elrod, Mindy G; Turner, Paul; Currie, Bart J; Phetsouvanh, Rattanaphone; Dance, David AB; Limmathurotsakul, Direk; Peacock, Sharon J; Chantratita, Narisara

The emergence of enterovirus D68 in England in autumn 2014 and the necessity for reinforcing enterovirus respiratory screening. (2017) Carrion Martin, AI; Pebody, RG; Danis, K; Ellis, J; Niazi, S; DE Lusignan, S; Brown, KE; Zambon, M; Allen, DJ

March 2017

Multitarget Quantitative PCR Improves Detection and Predicts Cultivability of the Pathogen Burkholderia pseudomallei. (2017) Göhler, Andre; Trung, Trinh Thanh; Hopf, Verena; Kohler, Christian; Hartleib, Jörg; Wuthiekanun, Vanaporn; Peacock, Sharon J; Limmathurotsakul, Direk; Tuanyok, Apichai; Steinmetz, Ivo

Towards improving early diagnosis of congenital Chagas disease in an endemic setting. (2017) Messenger, LA; Gilman, RH; Verastegui, M; Galdos-Cardenas, G; Sanchez, G; Valencia, E; Sanchez, L; Malaga, E; Rendell, VR; Jois, M; Shah, V; Santos, N; Del Carmen Abastoflor, M; LaFuente, C; Colanzi, R; Bozo, R; Bern, C; Working Group on Chagas disease in Bolivia and Peru

A proteasome inhibitor produced by Burkholderia pseudomallei modulates intracellular growth. (2017) Wagley, S; Vanaporn, M; Rinchai, D; Conejero, L; Lertmemongkolchai, G; Bancroft, GJ; Titball, RW

Genetic diversity of next generation antimalarial targets: A baseline for drug resistance surveillance programmes. (2017) Gomes, Ana Rita; Ravenhall, Matt; Benavente, Ernest Diez; Talman, Arthur; Sutherland, Colin; Roper, Cally; Clark, Taane G; Campino, Susana

Investigations into the within-host genomic diversity and phenotypic variation of Plasmodium falciparum. (2017) Murray, L

The role of the MarR transcriptional regulators RrpA and RrpB in the response of Campylobacter jejuni to oxidative and aerobic stress. (2017) Teixeira da Silva, D

Population structure of multidrug resistant Klebsiella oxytoca within hospitals across the UK and Ireland identifies sharing of virulence and resistance genes with K. pneumoniae. (2017) Moradigaravand, Danesh; Martin, Veronique; Peacock, Sharon J; Parkhill, Julian

February 2017

The In Vitro and In Vivo Effect of Carvacrol in Preventing Campylobacter Infection, Colonization and in Improving Productivity of Chicken Broilers. (2017) Kelly, C; Gundogdu, O; Pircalabioru, G; Cean, A; Scates, P; Linton, M; Pinkerton, L; Magowan, E; Stef, L; Simiz, E; Pet, I; Stewart, S; Stabler, R; Wren, B; Dorrell, N; Corcionivoschi, N

Complex Routes of Nosocomial Vancomycin-Resistant Enterococcus faecium Transmission Revealed by Genome Sequencing. (2017) Raven, Kathy E; Gouliouris, Theodore; Brodrick, Hayley; Coll, Francesc; Brown, Nicholas M; Reynolds, Rosy; Reuter, Sandra; Török, M Estée; Parkhill, Julian; Peacock, Sharon J

Evolution and Epidemiology of Multidrug-Resistant Klebsiella pneumoniae in the United Kingdom and Ireland. (2017) Moradigaravand, Danesh; Martin, Veronique; Peacock, Sharon J; Parkhill, Julian

Detection of viral respiratory pathogens in mild and severe acute respiratory infections in Singapore. (2017) Jiang, Lili; Lee, Vernon Jian Ming; Cui, Lin; Lin, Raymond; Tan, Chyi Lin; Tan, Linda Wei Lin; Lim, Wei-Yen; Leo, Yee-Sin; Low, Louie; Hibberd, Martin; Chen, Mark I-Cheng

Palmitoylation of Plasmodium alveolins promotes cytoskeletal function. (2017) Tremp, Annie Z; Al-Khattaf, Fatimah S; Dessens, Johannes T

Population genetic structure and adaptation of malaria parasites on the edge of endemic distribution. (2017) Duffy, Craig W; Ba, Hampate; Assefa, Samuel; Ahouidi, Ambroise D; Deh, Yacine B; Tandia, Abderahmane; Kirsebom, Freja CM; Kwiatkowski, Dominic P; Conway, David J

Plasmodium falciparum CRK4 directs continuous rounds of DNA replication during schizogony. (2017) Ganter, M; Goldberg, JM; Dvorin, JD; Paulo, JA; King, JG; Tripathi, AK; Paul, AS; Yang, J; Coppens, I; Jiang, RH; Elsworth, B; Baker, DA; Dinglasan, RR; Gygi, SP; Duraisingh, MT

The importance of the glycosylation of antimicrobial peptides: natural and synthetic approaches. (2017) Bednarska, Natalia G; Wren, Brendan W; Willcocks, Sam J

Erratum: EspL is a bacterial cysteine protease effector that cleaves RHIM proteins to block necroptosis and inflammation. (2017) Pearson, JS; Giogha, C; Mühlen, S; Nachbur, U; Pham, CL; Zhang, Y; Hildebrand, JM; Oates, CV; Lung, TW; Ingle, D; Dagley, LF; Bankovacki, A; Petrie, EJ; Schroeder, GN; Crepin, VF; Frankel, G; Masters, SL; Vince, J; Murphy, JM; Sunde, M; Webb, AI; Silke, J; Hartland, EL

Primary macrophages and J774 cells respond differently to infection with Mycobacterium tuberculosis. (2017) Andreu, Nuria; Phelan, Jody; de Sessions, Paola F; Cliff, Jacqueline M; Clark, Taane G; Hibberd, Martin L

ISL1 is a major susceptibility gene for classic bladder exstrophy and a regulator of urinary tract development. (2017) Zhang, Rong; Knapp, Michael; Suzuki, Kentaro; Kajioka, Daiki; Schmidt, Johanna M; Winkler, Jonas; Yilmaz, Öznur; Pleschka, Michael; Cao, Jia; Kockum, Christina Clementson; Barker, Gillian; Holmdahl, Gundela; Beaman, Glenda; Keene, David; Woolf, Adrian S; Cervellione, Raimondo M; Cheng, Wei; Wilkins, Simon; Gearhart, John P; Sirchia, Fabio; Di Grazia, Massimo; Ebert, Anne-Karolin; Rösch, Wolfgang; Ellinger, Jörg; Jenetzky, Ekkehart; Zwink, Nadine; Feitz, Wout F; Marcelis, Carlo; Schumacher, Johannes; Martinón-Torres, Federico; Hibberd, Martin Lloyd; Khor, Chiea Chuen; Heilmann-Heimbach, Stefanie; Barth, Sandra; Boyadjiev, Simeon A; Brusco, Alfredo; Ludwig, Michael; Newman, William; Nordenskjöld, Agneta; Yamada, Gen; Odermatt, Benjamin; Reutter, Heiko

Patient Characteristics, Management, and Predictors of Outcome from Severe Community-Onset Staphylococcal Sepsis in Northeast Thailand: A Prospective Multicenter Study. (2017) West, T Eoin; Wikraiphat, Chanthiwa; Tandhavanant, Sarunporn; Ariyaprasert, Pitchayanant; Suntornsut, Pornpan; Okamoto, Shawna; Mahavanakul, Weera; Srisamang, Pramot; Phiphitaporn, Sunchai; Anukunananchai, Jirasak; Chetchotisakd, Ploenchan; Peacock, Sharon J; Chantratita, Narisara

Whole genome sequencing of an African American family highlights toll like receptor 6 variants in Kawasaki disease susceptibility. (2017) Kim, Jihoon; Shimizu, Chisato; Kingsmore, Stephen F; Veeraraghavan, Narayanan; Levy, Eric; Ribeiro Dos Santos, Andre M; Yang, Hai; Flatley, Jay; Hoang, Long Truong; Hibberd, Martin L; Tremoulet, Adriana H; Harismendy, Olivier; Ohno-Machado, Lucila; Burns, Jane C

Enhancing the Biological Relevance of Machine Learning Classifiers for Reverse Vaccinology. (2017) Heinson, Ashley I; Gunawardana, Yawwani; Moesker, Bastiaan; Hume, Carmen C Denman; Vataga, Elena; Hall, Yper; Stylianou, Elena; McShane, Helen; Williams, Ann; Niranjan, Mahesan; Woelk, Christopher H

January 2017

Some Synonymous and Nonsynonymous gyrA Mutations in Mycobacterium tuberculosis Lead to Systematic False-Positive Fluoroquinolone Resistance Results with the Hain GenoType MTBDRsl Assays. (2017) Ajileye, Adebisi; Alvarez, Nataly; Merker, Matthias; Walker, Timothy M; Akter, Suriya; Brown, Kerstin; Moradigaravand, Danesh; Schön, Thomas; Andres, Sönke; Schleusener, Viola; Omar, Shaheed V; Coll, Francesc; Huang, Hairong; Diel, Roland; Ismail, Nazir; Parkhill, Julian; de Jong, Bouke C; Peto, Tim EA; Crook, Derrick W; Niemann, Stefan; Robledo, Jaime; Smith, E Grace; Peacock, Sharon J; Köser, Claudio U

The Type III Secretion System Effector SptP of Salmonella enterica Serovar Typhi. (2017) Johnson, Rebecca; Byrne, Alexander; Berger, Cedric N; Klemm, Elizabeth; Crepin, Valerie F; Dougan, Gordon; Frankel, Gad

Human Cytomegalovirus Transmission in Early Childhood and Impact of Maternal HIV in Zambia: A Molecular Study. (2017) Musonda, KG

Culture adaptation of malaria parasites selects for convergent loss-of-function mutants. (2017) Claessens, Antoine; Affara, Muna; Assefa, Samuel A; Kwiatkowski, Dominic P; Conway, David J

Whole genome sequencing reveals high-resolution epidemiological links between clinical and environmental Klebsiella pneumoniae. (2017) Runcharoen, Chakkaphan; Moradigaravand, Danesh; Blane, Beth; Paksanont, Suporn; Thammachote, Jeeranan; Anun, Suthatip; Parkhill, Julian; Chantratita, Narisara; Peacock, Sharon J

Global and regional dissemination and evolution of Burkholderia pseudomallei. (2017) Chewapreecha, C; Holden, MT; Vehkala, M; Välimäki, N; Yang, Z; Harris, SR; Mather, AE; Tuanyok, A; De Smet, B; Le Hello, S; Bizet, C; Mayo, M; Wuthiekanun, V; Limmathurotsakul, D; Phetsouvanh, R; Spratt, BG; Corander, J; Keim, P; Dougan, G; Dance, DA; Currie, BJ; Parkhill, J; Peacock, SJ

EspL is a bacterial cysteine protease effector that cleaves RHIM proteins to block necroptosis and inflammation. (2017) Pearson, Jaclyn S; Giogha, Cristina; Mühlen, Sabrina; Nachbur, Ueli; Pham, Chi LL; Zhang, Ying; Hildebrand, Joanne M; Oates, Clare V; Lung, Tania Wong Fok; Ingle, Danielle; Dagley, Laura F; Bankovacki, Aleksandra; Petrie, Emma J; Schroeder, Gunnar N; Crepin, Valerie F; Frankel, Gad; Masters, Seth L; Vince, James; Murphy, James M; Sunde, Margaret; Webb, Andrew I; Silke, John; Hartland, Elizabeth L

The global distribution and diversity of protein vaccine candidate antigens in the highly virulent Streptococcus pnuemoniae serotype 1. (2017) Cornick, Jennifer E; Tastan Bishop, Özlem; Yalcin, Feyruz; Kiran, Anmol M; Kumwenda, Benjamin; Chaguza, Chrispin; Govindpershad, Shanil; Ousmane, Sani; Senghore, Madikay; du Plessis, Mignon; Pluschke, Gerd; Ebruke, Chinelo; McGee, Lesley; Sigaùque, Beutel; Collard, Jean-Marc; Bentley, Stephen D; Kadioglu, Aras; Antonio, Martin; von Gottberg, Anne; French, Neil; Klugman, Keith P; Heyderman, Robert S; Alderson, Mark; Everett, Dean B; PAGe consortium

Whole Genome Sequence Analysis of Salmonella Typhi Isolated in Thailand before and after the Introduction of a National Immunization Program. (2017) Dyson, Zoe A; Thanh, Duy Pham; Bodhidatta, Ladaporn; Mason, Carl Jeffries; Srijan, Apichai; Rabaa, Maia A; Vinh, Phat Voong; Thanh, Tuyen Ha; Thwaites, Guy E; Baker, Stephen; Holt, Kathryn E

2017

Correction for Cairns et al., "Comparative Genome Analysis and Global Phylogeny of the Toxin Variant Clostridium difficile PCR Ribotype 017 Reveals the Evolution of Two Independent Sublineages". (2017) Cairns, MD; Preston, MD; Hall, CL; Gerding, DN; Hawkey, PM; Kato, H; Kim, H; Kuijper, EJ; Lawley, TD; Pituch, H; Reid, S; Kullin, B; Riley, TV; Solomon, K; Tsai, PJ; Weese, JS; Stabler, RA; Wren, BW

The in vitro and in vivo effect of Carvacrol in preventing Campylobacter infection, colonisation and improve chicken broilers productivity. (2017) Carmel, K; Gundogdu, O; Scates, P; Linton, M; Laurette, P; Stabler, R; Dorrell, N; Wren, WB; Corcionivoschi, N

Investigating the biogenesis of Campylobacter jejuni outer membrane vesicle production. (2017) Davies, C; Taylor, A; Gundogdu, O; Wren, WB; Elmi, A; Kelly, D; Dorrell, N

The bile salt sodium taurocholate induces Campylobacter jejuni outer membrane vesicle production and increases OMV-associated proteolytic activity. (2017) Elmi, A; Dorey, A; Watson, E; Jagatia, H; Gundogdu, O; Bajaj-Elliott, M; Wren, WB; Smith, DGE; Dorrell, N

Complementary Sources of Protein Functional Information: The Far Side of GO. (2017) Furnham, N

The Campylobacter jejuni oxidative stress regulator RrpB is associated with a genomic hypervariable region and altered oxidative stress resistance. (2017) Gundogdu, O; Teixeira da Silva, D; Mohammad, B; Elmi, A; Wren, WB; van Vliet, A; Dorrell, N

Further investigation of the roles of fibronectin-binding proteins CadF and FlpA during Campylobacter jejuni interactions with intestinal epithelial cells. (2017) Hussein, M; Naz, N; Gundogdu, O; Wren, WB; Elmi, A; Dorrell, N

Investigation of the role of Campylobacter jejuni Type VI secretion system in secretion of effectors and interactions with host cells. (2017) Liaw, J; Hachani, A; Wren, WB; Gundogdu, O; Dorrell, N

Efficient prevention of Campylobacter spp. entrance in broiler houses improves flock performance at slaughter. (2017) McKenna, A; Nompilo, S; Richmond, A; Gundogdu, O; Green, BD; Corcionivoschi, N

Investigating Campylobacter jejuni interactions with endoplasmic reticulum in intestinal epithelial cells resulting in induction of the unfolded protein response. (2017) di Sario, G; Gundogdu, O; Hussein, M; Wren, WB; Canonico, B; Papa, S; Elmi, A; Dorrell, N