Items where Faculty or Department is "Department of Infection Biology"

Items where Faculty or Department is "Department of Infection Biology"

LSHTM Organisational Structure (57264)

Faculty of Infectious and Tropical Diseases (18516)

Department of Infection Biology (5552)

Dept of Immunology and Infection (-2019) (972)

Dept of Pathogen Molecular Biology (-2019) (1192)

Number of items: 287.

A

Rapid Genomic Characterization and Global Surveillance of Klebsiella Using Pathogenwatch. (2021) Argimón, Silvia; David, Sophia; Underwood, Anthony; Abrudan, Monica; Wheeler, Nicole E; Kekre, Mihir; Abudahab, Khalil; Yeats, Corin A; Goater, Richard; Taylor, Ben; Harste, Harry; Muddyman, Dawn; Feil, Edward J; Brisse, Sylvain; Holt, Kathryn; Donado-Godoy, Pilar; Ravikumar, KL; Okeke, Iruka N; Carlos, Celia; Aanensen, David M; NIHR Global Health Research Unit on Genomic Surveillance of Anti

Linezolid Population Pharmacokinetics in South African Adults with Drug-Resistant Tuberculosis. (2021) Abdelwahab, Mahmoud Tareq; Wasserman, Sean; Brust, James CM; Dheda, Keertan; Wiesner, Lubbe; Gandhi, Neel R; Warren, Robin M; Sirgel, Frederick A; Meintjes, Graeme; Maartens, Gary; Denti, Paolo

The X-ray structure of L-threonine dehydrogenase from the common hospital pathogen Clostridium difficile. (2021) Adjogatse, Eyram; Bennett, Josh; Guo, Jingxu; Erskine, Peter T; Wood, Steve P; Wren, Brendan W; Cooper, Jonathan B

Direct maternal morbidity and the risk of pregnancy-related deaths, stillbirths, and neonatal deaths in South Asia and sub-Saharan Africa: A population-based prospective cohort study in 8 countries. (2021) Aftab, Fahad; Ahmed, Imran; Ahmed, Salahuddin; Ali, Said Mohammed; Amenga-Etego, Seeba; Ariff, Shabina; Bahl, Rajiv; Baqui, Abdullah H; Begum, Nazma; Bhutta, Zulfiqar A; Biemba, Godfrey; Cousens, Simon; Das, Vinita; Deb, Saikat; Dhingra, Usha; Dutta, Arup; Edmond, Karen; Esamai, Fabian; Ghosh, Amit Kumar; Gisore, Peter; Grogan, Caroline; Hamer, Davidson H; Herlihy, Julie; Hurt, Lisa; Ilyas, Muhammad; Jehan, Fyezah; Juma, Mohammed Hamad; Kalonji, Michel; Khanam, Rasheda; Kirkwood, Betty R; Kumar, Aarti; Kumar, Alok; Kumar, Vishwajeet; Manu, Alexander; Marete, Irene; Mehmood, Usma; Minckas, Nicole; Mishra, Shambhavi; Mitra, Dipak K; Moin, Mamun Ibne; Muhammad, Karim; Newton, Sam; Ngaima, Serge; Nguwo, Andre; Nisar, Muhammad Imran; Otomba, John; Quaiyum, Mohammad Abdul; Sarrassat, Sophie; Sazawal, Sunil; Semrau, Katherine E; Shannon, Caitlin; Singh, Vinay Pratap; Soofi, Sajid; Soremekun, Seyi; Suleiman, Atifa Mohammed; Sunday, Venantius; Dilip, Thandassery R; Tshefu, Antoinette; Wasan, Yaqub; Yeboah-Antwi, Kojo; Yoshida, Sachiyo; Zaidi, Anita K; Alliance for Maternal and Newborn Health Improvement (AMANHI) ma

Sources of persistent malaria transmission in a setting with effective malaria control in eastern Uganda: a longitudinal, observational cohort study. (2021) Andolina, Chiara; Rek, John C; Briggs, Jessica; Okoth, Joseph; Musiime, Alex; Ramjith, Jordache; Teyssier, Noam; Conrad, Melissa; Nankabirwa, Joaniter I; Lanke, Kjerstin; Rodriguez-Barraquer, Isabel; Meerstein-Kessel, Lisette; Arinaitwe, Emmanuel; Olwoch, Peter; Rosenthal, Philip J; Kamya, Moses R; Dorsey, Grant; Greenhouse, Bryan; Drakeley, Chris; Staedke, Sarah G; Bousema, Teun

Infectivity of patent Plasmodium falciparum gametocyte carriers to mosquitoes: establishing capacity to investigate the infectious reservoir of malaria in a low-transmission setting in The Gambia. (2021) Ahmad, Abdullahi; Soumare, Harouna M; Camara, Muhammed M; Jadama, Lamin; Gaye, Pa Modou; Bittaye, Haddy; Bradley, John; Achan, Jane; Bousema, Teun; D'Alessandro, Umberto; Drakeley, Chris; Moreno, Marta

A global resource for genomic predictions of antimicrobial resistance and surveillance of Salmonella Typhi at pathogenwatch. (2021) Argimón, Silvia; Yeats, Corin A; Goater, Richard J; Abudahab, Khalil; Taylor, Benjamin; Underwood, Anthony; Sánchez-Busó, Leonor; Wong, Vanessa K; Dyson, Zoe A; Nair, Satheesh; Park, Se Eun; Marks, Florian; Page, Andrew J; Keane, Jacqueline A; Baker, Stephen; Holt, Kathryn E; Dougan, Gordon; Aanensen, David M

Correction to: Under pressure: phenotypic divergence and convergence associated with microhabitat adaptations in Triatominae. (2021) Abad-Franch, Fernando; Monteiro, Fernando A; Pavan, Márcio G; Patterson, James S; Bargues, M Dolores; Zuriaga, M Ángeles; Aguilar, Marcelo; Beard, Charles B; Mas-Coma, Santiago; Miles, Michael A

Under pressure: phenotypic divergence and convergence associated with microhabitat adaptations in Triatominae. (2021) Abad-Franch, Fernando; Monteiro, Fernando A; Pavan, Márcio G; Patterson, James S; Bargues, M Dolores; Zuriaga, M Ángeles; Aguilar, Marcelo; Beard, Charles B; Mas-Coma, Santiago; Miles, Michael A

Gametocyte carriage after seasonal malaria chemoprevention in Plasmodium falciparum infected asymptomatic children. (2021) Ahmad, Abdullahi; Prom, Aurelia; Bradley, John; Ndiath, Mamadou; Etoketim, Blessed; Bah, Mamadou; Van Geertruyden, Jean-Pierre; Drakeley, Chris; Bousema, Teun; Achan, Jane; D'Alessandro, Umberto

Plasmodium falciparum erythrocyte membrane protein 1 variants induce cell swelling and disrupt the blood-brain barrier in cerebral malaria. (2021) Adams, Yvonne; Olsen, Rebecca W; Bengtsson, Anja; Dalgaard, Nanna; Zdioruk, Mykola; Satpathi, Sanghamitra; Behera, Prativa K; Sahu, Praveen K; Lawler, Sean E; Qvortrup, Klaus; Wassmer, Samuel C; Jensen, Anja TR

External validation of a deep learning electrocardiogram algorithm to detect ventricular dysfunction. (2021) Attia, Itzhak Zachi; Tseng, Andrew S; Benavente, Ernest Diez; Medina-Inojosa, Jose R; Clark, Taane G; Malyutina, Sofia; Kapa, Suraj; Schirmer, Henrik; Kudryavtsev, Alexander V; Noseworthy, Peter A; Carter, Rickey E; Ryabikov, Andrew; Perel, Pablo; Friedman, Paul A; Leon, David A; Lopez-Jimenez, Francisco

B

Malaria protection due to sickle haemoglobin depends on parasite genotype. (2021) Band, Gavin; Leffler, Ellen M; Jallow, Muminatou; Sisay-Joof, Fatoumatta; Ndila, Carolyne M; Macharia, Alexander W; Hubbart, Christina; Jeffreys, Anna E; Rowlands, Kate; Nguyen, Thuy; Gonçalves, Sónia; Ariani, Cristina V; Stalker, Jim; Pearson, Richard D; Amato, Roberto; Drury, Eleanor; Sirugo, Giorgio; d'Alessandro, Umberto; Bojang, Kalifa A; Marsh, Kevin; Peshu, Norbert; Saelens, Joseph W; Diakité, Mahamadou; Taylor, Steve M; Conway, David J; Williams, Thomas N; Rockett, Kirk A; Kwiatkowski, Dominic P

Global phylogeny of Treponema pallidum lineages reveals recent expansion and spread of contemporary syphilis. (2021) Beale, Mathew A; Marks, Michael; Cole, Michelle J; Lee, Min-Kuang; Pitt, Rachel; Ruis, Christopher; Balla, Eszter; Crucitti, Tania; Ewens, Michael; Fernández-Naval, Candela; Grankvist, Anna; Guiver, Malcolm; Kenyon, Chris R; Khairullin, Rafil; Kularatne, Ranmini; Arando, Maider; Molini, Barbara J; Obukhov, Andrey; Page, Emma E; Petrovay, Fruzsina; Rietmeijer, Cornelis; Rowley, Dominic; Shokoples, Sandy; Smit, Erasmus; Sweeney, Emma L; Taiaroa, George; Vera, Jaime H; Wennerås, Christine; Whiley, David M; Williamson, Deborah A; Hughes, Gwenda; Naidu, Prenilla; Unemo, Magnus; Krajden, Mel; Lukehart, Sheila A; Morshed, Muhammad G; Fifer, Helen; Thomson, Nicholas R

Rationally designed mariner vectors for functional genomic analysis of Actinobacillus pleuropneumoniae and other Pasteurellaceae species by transposon-directed insertion-site sequencing (TraDIS). (2021) Bossé, Janine T; Li, Yanwen; Leanse, Leon G; Zhou, Liqing; Chaudhuri, Roy R; Peters, Sarah E; Wang, Jinhong; Maglennon, Gareth A; Holden, Matthew TG; Maskell, Duncan J; Tucker, Alexander W; Wren, Brendan W; Rycroft, Andrew N; Langford, Paul R; BRaDP1T consortium

Complete genome for Actinobacillus pleuropneumoniae serovar 8 reference strain 405: comparative analysis with draft genomes for different laboratory stock cultures indicates little genetic variation. (2021) Bossé, Janine T; Li, Yanwen; Cohen, Liza Miriam; Stegger, Marc; Angen, Øystein; Lacouture, Sonia; Gottschalk, Marcelo; Lei, Liancheng; Koene, Miriam; Kuhnert, Peter; Bandara, Aloka B; Inzana, Thomas J; Holden, Matthew TG; Harris, David; Oshota, Olusegun; Maskell, Duncan J; Tucker, Alexander W; Wren, Brendan W; Rycroft, Andrew N; Langford, Paul R; On Behalf Of The BRaDP T Consortium

Technical Workflow Development for Integrating Drone Surveys and Entomological Sampling to Characterise Aquatic Larval Habitats of Anopheles funestus in Agricultural Landscapes in Côte d'Ivoire. (2021) Byrne, Isabel; Chan, Kallista; Manrique, Edgar; Lines, Jo; Wolie, Rosine Z; Trujillano, Fedra; Garay, Gabriel Jimenez; Del Prado Cortez, Miguel Nunez; Alatrista-Salas, Hugo; Sternberg, Eleanore; Cook, Jackie; N'Guessan, Raphael; Koffi, Alphonsine; Ahoua Alou, Ludovic P; Apollinaire, Nombre; Messenger, Louisa A; Kristan, Mojca; Carrasco-Escobar, Gabriel; Fornace, Kimberly

Estimating the annual dengue force of infection from the age of reporting primary infections across urban centres in endemic countries. (2021) Biggs, Joseph R; Sy, Ava Kristy; Sherratt, Katharine; Brady, Oliver J; Kucharski, Adam J; Funk, Sebastian; Reyes, Mary Anne Joy; Quinones, Mary Ann; Jones-Warner, William; Avelino, Ferchito L; Sucaldito, Nemia L; Tandoc, Amado O; la Paz, Eva Cutiongco-de; Capeding, Maria Rosario Z; Padilla, Carmencita D; Hafalla, Julius Clemence R; Hibberd, Martin L

The in vitro and in vivo anti-virulent effect of organic acid mixtures against Eimeria tenella and Eimeria bovis. (2021) Balta, Igori; Marcu, Adela; Linton, Mark; Kelly, Carmel; Stef, Lavinia; Pet, Ioan; Ward, Patrick; Pircalabioru, Gratiela Gradisteanu; Chifiriuc, Carmen; Gundogdu, Ozan; Callaway, Todd; Corcionivoschi, Nicolae

Serological Evidence of Widespread Zika Transmission across the Philippines. (2021) Biggs, Joseph R; Sy, Ava Kristy; Brady, Oliver J; Kucharski, Adam J; Funk, Sebastian; Tu, Yun-Hung; Reyes, Mary Anne Joy; Quinones, Mary Ann; Jones-Warner, William; Ashall, James; Avelino, Ferchito L; Sucaldito, Nemia L; Tandoc, Amado O; Cutiongco-de la Paz, Eva; Capeding, Maria Rosario Z; Padilla, Carmencita D; Hibberd, Martin L; Hafalla, Julius Clemence R

Persistent Submicroscopic Plasmodium falciparum Parasitemia 72 Hours after Treatment with Artemether-Lumefantrine Predicts 42-Day Treatment Failure in Mali and Burkina Faso. (2021) Beshir, Khalid B; Diallo, Nouhoum; Somé, Fabrice A; Sombie, Salif; Zongo, Issaka; Fofana, Bakary; Traore, Aliou; Dama, Souleymane; Bamadio, Amadou; Traore, Oumar B; Coulibaly, Sam A; Maurice, Ouattara S; Diarra, Amidou; Kaboré, Jean Moise; Kodio, Aly; Togo, Amadou Hamidou; Dara, Niawanlou; Coulibaly, Moctar; Dao, Francois; Nikiema, Frederic; Compaore, Yves D; Kabore, Naomie T; Barry, Nouhoun; Soulama, Issiaka; Sagara, Issaka; Sirima, Sodiomon B; Ouédraogo, Jean-Bosco; Djimde, Abdoulaye; Sutherland, Colin J

The association of a novel digital tool for assessment of early childhood cognitive development, 'DEvelopmental assessment on an E-Platform (DEEP)', with growth in rural India: A proof of concept study. (2021) Bhavnani, Supriya; Mukherjee, Debarati; Bhopal, Sunil; Sharma, Kamal Kant; Dasgupta, Jayashree; Divan, Gauri; Soremekun, Seyi; Roy, Reetabrata; Kirkwood, Betty; Patel, Vikram

Design and synthesis of Mannich base-type derivatives containing imidazole and benzimidazole as lead compounds for drug discovery in Chagas Disease. (2021) Beltran-Hortelano, Iván; Atherton, Richard L; Rubio-Hernández, Mercedes; Sanz-Serrano, Julen; Alcolea, Verónica; Kelly, John M; Pérez-Silanes, Silvia; Olmo, Francisco

Mixtures of natural antimicrobials can reduce Campylobacter jejuni, Salmonella enterica and Clostridium perfringens infections and cellular inflammatory response in MDCK cells. (2021) Balta, Igori; Marcu, Adela; Linton, Mark; Kelly, Carmel; Gundogdu, Ozan; Stef, Lavinia; Pet, Ioan; Ward, Patrick; Deshaies, Myriam; Callaway, Todd; Sopharat, Phittawat; Gradisteanu-Pircalabioru, Gratiela; Corcionivoschi, Nicolae

Environmental and spatial risk factors for the larval habitats of Plasmodium knowlesi vectors in Sabah, Malaysian Borneo. (2021) Byrne, Isabel; Aure, Wilfredo; Manin, Benny O; Vythilingam, Indra; Ferguson, Heather M; Drakeley, Chris J; Chua, Tock H; Fornace, Kimberly M

Distinctive genetic structure and selection patterns in Plasmodium vivax from South Asia and East Africa. (2021) Benavente, Ernest Diez; Manko, Emilia; Phelan, Jody; Campos, Monica; Nolder, Debbie; Fernandez, Diana; Velez-Tobon, Gabriel; Castaño, Alberto Tobón; Dombrowski, Jamille G; Marinho, Claudio RF; Aguiar, Anna Caroline C; Pereira, Dhelio Batista; Sriprawat, Kanlaya; Nosten, Francois; Moon, Robert; Sutherland, Colin J; Campino, Susana; Clark, Taane G

Is there an association between long-term antibiotics for acne and subsequent infection sequelae and antimicrobial resistance? A systematic review. (2021) Bhate, Ketaki; Lin, Liang-Yu; Barbieri, John S; Leyrat, Clémence; Hopkins, Susan; Stabler, Richard; Shallcross, Laura; Smeeth, Liam; Francis, Nick; Mathur, Rohini; Langan, Sinéad M; Sinnott, Sarah-Jo

Ca2+ signals critical for egress and gametogenesis in malaria parasites depend on a multipass membrane protein that interacts with PKG. (2021) Balestra, Aurélia C; Koussis, Konstantinos; Klages, Natacha; Howell, Steven A; Flynn, Helen R; Bantscheff, Marcus; Pasquarello, Carla; Perrin, Abigail J; Brusini, Lorenzo; Arboit, Patrizia; Sanz, Olalla; Castaño, Laura Peces-Barba; Withers-Martinez, Chrislaine; Hainard, Alexandre; Ghidelli-Disse, Sonja; Snijders, Ambrosius P; Baker, David A; Blackman, Michael J; Brochet, Mathieu

Is there an association between long-term antibiotics for acne and subsequent infection sequelae and antimicrobial resistance? A systematic review protocol. (2021) Bhate, Ketaki; Lin, Liang-Yu; Barbieri, John; Leyrat, Clémence; Hopkins, Susan; Stabler, Richard; Shallcross, Laura; Smeeth, Liam; Francis, Nick A; Mathur, Rohini; Langan, Sinéad M; Sinnott, Sarah-Jo

Effectiveness and cost-effectiveness of reactive, targeted indoor residual spraying for malaria control in low-transmission settings: a cluster-randomised, non-inferiority trial in South Africa. (2021) Bath, David; Cook, Jackie; Govere, John; Mathebula, Phillemon; Morris, Natashia; Hlongwana, Khumbulani; Raman, Jaishree; Seocharan, Ishen; Zitha, Alpheus; Zitha, Matimba; Mabuza, Aaron; Mbokazi, Frans; Machaba, Elliot; Mabunda, Erik; Jamesboy, Eunice; Biggs, Joseph; Drakeley, Chris; Moonasar, Devanand; Maharaj, Rajendra; Coetzee, Maureen; Pitt, Catherine; Kleinschmidt, Immo

Within-household clustering of genetically related Plasmodium falciparum infections in a moderate transmission area of Uganda. (2021) Briggs, Jessica; Kuchta, Alison; Murphy, Max; Tessema, Sofonias; Arinaitwe, Emmanuel; Rek, John; Chen, Anna; Nankabirwa, Joaniter I; Drakeley, Chris; Smith, David; Bousema, Teun; Kamya, Moses; Rodriguez-Barraquer, Isabel; Staedke, Sarah; Dorsey, Grant; Rosenthal, Philip J; Greenhouse, Bryan

The effect of natural antimicrobials on the Campylobacter coli T6SS+/- during in vitro infection assays and on their ability to adhere to chicken skin and carcasses. (2021) Balta, Igori; Linton, Mark; Pinkerton, Laurette; Kelly, Carmel; Ward, Patrick; Stef, Lavinia; Pet, Ioan; Horablaga, Adina; Gundogdu, Ozan; Corcionivoschi, Nicolae

C

Correction: Serologically Defined Variations in Malaria Endemicity in Pará State, Brazil. (2021) Cunha, Maristela G; Silva, Eliane S; Sepúlveda, Nuno; Costa, Sheyla PT; Saboia, Tiago C; Guerreiro, João F; Póvoa, Marinete M; Corran, Patrick H; Riley, Eleanor; Drakeley, Chris J

Genomics, social media and mobile phone data enable mapping of SARS-CoV-2 lineages to inform health policy in Bangladesh. (2021) Cowley, Lauren A; Afrad, Mokibul Hassan; Rahman, Sadia Isfat Ara; Mamun, Md Mahfuz Al; Chin, Taylor; Mahmud, Ayesha; Rahman, Mohammed Ziaur; Billah, Mallick Masum; Khan, Manjur Hossain; Sultana, Sharmin; Khondaker, Tilovatul; Baker, Stephen; Banik, Nandita; Alam, Ahmed Nawsher; Mannoor, Kaiissar; Banu, Sayera; Chowdhury, Anir; Flora, Meerjady Sabrina; Thomson, Nicholas R; Buckee, Caroline O; Qadri, Firdausi; Shirin, Tahmina

Key variables affecting genetic distance calculations in genomic epidemiology. (2021) Coll, Francesc

Determining seropositivity-A review of approaches to define population seroprevalence when using multiplex bead assays to assess burden of tropical diseases. (2021) Chan, YuYen; Fornace, Kimberly; Wu, Lindsey; Arnold, Benjamin F; Priest, Jeffrey W; Martin, Diana L; Chang, Michelle A; Cook, Jackie; Stresman, Gillian; Drakeley, Chris

Foodborne Pathogen Campylobacter. (2021) Corcionivoschi, Nicolae; Gundogdu, Ozan

Antimalarial drug resistance markers in human immunodeficiency virus (HIV)-positive and HIV-negative adults with asymptomatic malaria infections in Port Harcourt, Nigeria. (2021) Chijioke-Nwauche, Ifeyinwa; Oguike, Mary C; Nwauche, Chijioke A; Beshir, Khalid B; Sutherland, Colin J

Evolution of Sequence Type 4821 Clonal Complex Hyperinvasive and Quinolone-Resistant Meningococci. (2021) Chen, Mingliang; Harrison, Odile B; Bratcher, Holly B; Bo, Zhiyan; Jolley, Keith A; Rodrigues, Charlene MC; Bray, James E; Guo, Qinglan; Zhang, Xi; Chen, Min; Maiden, Martin CJ

Evolutionary histories and antimicrobial resistance in Shigella flexneri and Shigella sonnei in Southeast Asia. (2021) Chung The, Hao; Bodhidatta, Ladaporn; Pham, Duy Thanh; Mason, Carl J; Ha Thanh, Tuyen; Voong Vinh, Phat; Turner, Paul; Hem, Sopheak; Dance, David AB; Newton, Paul N; Phetsouvanh, Rattanaphone; Davong, Viengmon; Thwaites, Guy E; Thomson, Nicholas R; Baker, Stephen; Rabaa, Maia A

Spontaneous Emergence of Azithromycin Resistance in Independent Lineages of Salmonella Typhi in Northern India. (2021) Carey, Megan E; Jain, Ruby; Yousuf, Mohammad; Maes, Mailis; Dyson, Zoe A; Thu, Trang Nguyen Hoang; Nguyen Thi Nguyen, To; Ho Ngoc Dan, Thanh; Nhu Pham Nguyen, Quynh; Mahindroo, Jaspreet; Thanh Pham, Duy; Sandha, Kawaljeet Singh; Baker, Stephen; Taneja, Neelam

Fatal Attraction: The Case of Toxic Soluble Dimers of Truncated PQBP-1 Mutants in X-Linked Intellectual Disability. (2021) Chen, Yu Wai; Rahman, Shah Kamranur

Prevalence of and risk factors for curable sexually transmitted infections on Bubaque Island, Guinea Bissau. (2021) Cowley, Giovanna; Milne, Gregory; Teixeira da Silva, Eunice; Nakutum, Jose; Rodrigues, Amabelia; Vasileva, Hristina; Mabey, David; Versteeg, Bart; Last, Anna

Carriage Dynamics of Pneumococcal Serotypes in Naturally Colonized Infants in a Rural African Setting During the First Year of Life. (2021) Chaguza, Chrispin; Senghore, Madikay; Bojang, Ebrima; Lo, Stephanie W; Ebruke, Chinelo; Gladstone, Rebecca A; Tientcheu, Peggy-Estelle; Bancroft, Rowan E; Worwui, Archibald; Foster-Nyarko, Ebenezer; Ceesay, Fatima; Okoi, Catherine; McGee, Lesley; Klugman, Keith P; Breiman, Robert F; Barer, Michael R; Adegbola, Richard A; Antonio, Martin; Bentley, Stephen D; Kwambana-Adams, Brenda A

Editorial: Developments in Campylobacter, Helicobacter & Related Organisms Research - CHRO 2019. (2021) Corcionivoschi, Nicolae; Thompson, Stuart A; Gundogdu, Ozan

D

A position statement and practical guide to the use of particulate filtering facepiece respirators (N95, FFP2, or equivalent) for South African health workers exposed to respiratory pathogens including Mycobacterium tuberculosis and SARS-CoV-2. (2021) Dheda, K; Charalambous, S; Kharat, AS; von Delft, A; van Zyl-SMit, RN; Perumal, R; Allwood, BW; Esmail, A; Wong, ML; Duse, AG; Richards, G; Feldman, C; Mer, M; Nyamande, K; Lalla, U; Koegelenberg, CFN; Venter, F; Dawood, H; Adams, S; Ntusi, NAB; van der Westhuizen, H-M; Moosa, M-YS; van der Westhuizen, NA; Moultrie, H; Nel, J; Hausler, H; Preiser, W; Lasersohn, L; Zar, HJ; Churchyard, GJ

Five Years of GenoTyphi: Updates to the Global Salmonella Typhi Genotyping Framework. (2021) Dyson, Zoe A; Holt, Kathryn E

Mass drug administration of ivermectin and dihydroartemisinin-piperaquine against malaria in settings with high coverage of standard control interventions: a cluster-randomised controlled trial in The Gambia. (2021) Dabira, Edgard D; Soumare, Harouna M; Conteh, Bakary; Ceesay, Fatima; Ndiath, Mamadou O; Bradley, John; Mohammed, Nuredin; Kandeh, Balla; Smit, Menno R; Slater, Hannah; Peeters Grietens, Koen; Broekhuizen, Henk; Bousema, Teun; Drakeley, Chris; Lindsay, Steve W; Achan, Jane; D'Alessandro, Umberto

The impact of viral mutations on recognition by SARS-CoV-2 specific T cells. (2021) de Silva, Thushan I; Liu, Guihai; Lindsey, Benjamin B; Dong, Danning; Moore, Shona C; Hsu, Nienyun Sharon; Shah, Dhruv; Wellington, Dannielle; Mentzer, Alexander J; Angyal, Adrienn; Brown, Rebecca; Parker, Matthew D; Ying, Zixi; Yao, Xuan; Turtle, Lance; Dunachie, Susanna; COVID-19 Genomics UK (COG-UK) Consortium; Maini, Mala K; Ogg, Graham; Knight, Julian C; ISARIC4C Investigators; Peng, Yanchun; Rowland-Jones, Sarah L; Dong, Tao

Development of a Hamster Natural Transmission Model of SARS-CoV-2 Infection. (2021) Dowall, Stuart; Salguero, Francisco J; Wiblin, Nathan; Fotheringham, Susan; Hatch, Graham; Parks, Simon; Gowan, Kathryn; Harris, Debbie; Carnell, Oliver; Fell, Rachel; Watson, Robert; Graham, Victoria; Gooch, Karen; Hall, Yper; Mizen, Simon; Hewson, Roger

Screening for Tuberculosis in Migrants: A Survey by the Global Tuberculosis Network. (2021) D'Ambrosio, Lia; Centis, Rosella; Dobler, Claudia C; Tiberi, Simon; Matteelli, Alberto; Denholm, Justin; Zenner, Dominik; Al-Abri, Seif; Alyaquobi, Fatma; Arbex, Marcos Abdo; Belilovskiy, Evgeny; Blanc, François-Xavier; Borisov, Sergey; Carvalho, Anna Cristina C; Chakaya, Jeremiah Muhwa; Cocco, Nicola; Codecasa, Luigi Ruffo; Dalcolmo, Margareth Pretti; Dheda, Keertan; Dinh-Xuan, Anh Tuan; Esposito, Susanna R; García-García, José-María; Li, Yang; Manga, Selene; Marchese, Valentina; Muñoz Torrico, Marcela; Pontali, Emanuele; Rendon, Adrián; Rossato Silva, Denise; Singla, Rupak; Solovic, Ivan; Sotgiu, Giovanni; van den Boom, Martin; Nhung, Nguyen Viet; Zellweger, Jean-Pierre; Migliori, Giovanni Battista

Molecular epidemiology and population genomics of Plasmodium knowlesi. (2021) Divis, Paul CS; Singh, Balbir; Conway, David J

Subpatent Plasmodium with mutant pfmdr1, pfcrt, and pvmdr1 alleles from endemic provinces in Mindanao, the Philippines: implications for local malaria elimination. (2021) Dacuma, Mary Grace B; Dimalibot, Judeline C; Baril, Joselito A; Allian, Fatima; Bahidjan, Dayang Karna; Mori, Virgilio; Asri, Sukarno; Yadao, Federico; Notario, Walter; Bona, Ernesto; Jr, Jose Barroquillo; Oguike, Mary; Drakeley, Chris; Hallett, Rachel; Sutherland, Colin J

wMel Wolbachia genome remains stable after 7 years in Australian Aedes aegypti field populations. (2021) Dainty, Kimberley R; Hawkey, Jane; Judd, Louise M; Pacidônio, Etiene C; Duyvestyn, Johanna M; Gonçalves, Daniela S; Lin, Silk Yu; O'Donnell, Tanya B; O'Neill, Scott L; Simmons, Cameron P; Holt, Kathryn E; Flores, Heather A

Framing the Drivers of Antimicrobial Resistance in Tanzania. (2021) Durrance-Bagale, Anna; Jung, Anne-Sophie; Frumence, Gasto; Mboera, Leonard; Mshana, Stephen E; Sindato, Calvin; Clark, Taane G; Matee, Mecky; Legido-Quigley, Helena

Herpesviruses Serology Distinguishes Different Subgroups of Patients From the United Kingdom Myalgic Encephalomyelitis/Chronic Fatigue Syndrome Biobank. (2021) Domingues, Tiago Dias; Grabowska, Anna D; Lee, Ji-Sook; Ameijeiras-Alonso, Jose; Westermeier, Francisco; Scheibenbogen, Carmen; Cliff, Jacqueline M; Nacul, Luis; Lacerda, Eliana M; Mouriño, Helena; Sepúlveda, Nuno

Crystalloids: Fascinating Parasite Organelles Essential for Malaria Transmission. (2021) Dessens, Johannes T; Tremp, Annie Z; Saeed, Sadia

Measuring transfer of human norovirus during sandwich production: Simulating the role of food, food handlers and the environment. (2021) Derrick, Jade; Hollinghurst, Philippa; O'Brien, Sarah; Elviss, Nicola; Allen, David J; Iturriza-Gómara, Miren

Genomic contextualisation of ancient DNA molecular data from an Argentinian fifth pandemic Vibrio cholerae infection. (2021) Dorman, Matthew J; Thomson, Nicholas R; Campos, Josefina

Using deep learning to identify recent positive selection in malaria parasite sequence data. (2021) Deelder, Wouter; Benavente, Ernest Diez; Phelan, Jody; Manko, Emilia; Campino, Susana; Palla, Luigi; Clark, Taane G

The Frequency and Effect of Granulocytic Myeloid-Derived Suppressor Cells on Mycobacterial Survival in Patients With Tuberculosis: A Preliminary Report. (2021) Davids, Malika; Pooran, Anil; Smith, Liezel; Tomasicchio, Michele; Dheda, Keertan

The Immediate Effects of a Combined Mass Drug Administration and Indoor Residual Spraying Campaign to Accelerate Progress Toward Malaria Elimination in Grande-Anse, Haiti. (2021) Druetz, Thomas; Stresman, Gillian; Ashton, Ruth A; Joseph, Vena; van den Hoogen, Lotus; Worges, Matt; Hamre, Karen ES; Fayette, Carl; Monestime, Frank; Impoinvil, Daniel; Rogier, Eric; Chang, Michelle A; Lemoine, Jean Frantz; Drakeley, Chris; Eisele, Thomas P

Adverse pregnancy outcomes are associated with Plasmodium vivax malaria in a prospective cohort of women from the Brazilian Amazon. (2021) Dombrowski, Jamille Gregório; Barateiro, André; Peixoto, Erika Paula Machado; Barros, André Boler Cláudio da Silva; Souza, Rodrigo Medeiros de; Clark, Taane Gregory; Campino, Susana; Wrenger, Carsten; Wunderlich, Gerhard; Palmisano, Giuseppe; Epiphanio, Sabrina; Gonçalves, Lígia Antunes; Marinho, Claudio Romero Farias

Drug resistance profile and clonality of Plasmodium falciparum parasites in Cape Verde: the 2017 malaria outbreak. (2021) Da Veiga Leal, Silvania; Ward, Daniel; Campino, Susana; Benavente, Ernest Diez; Ibrahim, Amy; Claret, Tânia; Isaías, Varela; Monteiro, Davidson; Clark, Taane G; Gonçalves, Luzia; Valdez, Tomas; da Luz Lima Mendonça, Maria; Silveira, Henrique; Nogueira, Fatima

High initial IgG antibody levels against Orientia tsutsugamushi are associated with an increased risk of severe scrub typhus infection. (2021) Devamani, Carol S; Prakash, John AJ; Alexander, Neal; Stone, William; Gunasekaran, Karthik; Rose, Winsley; Schmidt, Wolf-Peter

Molecular diagnostic assays for the detection of common bacterial meningitis pathogens: A narrative review. (2021) Diallo, Kanny; Feteh, Vitalis F; Ibe, Lilian; Antonio, Martin; Caugant, Dominique A; du Plessis, Mignon; Deghmane, Ala-Eddine; Feavers, Ian M; Fernandez, Katya; Fox, LeAnne M; Rodrigues, Charlene MC; Ronveaux, Olivier; Taha, Muhamed-Kheir; Wang, Xin; Brueggemann, Angela B; Maiden, Martin CJ; Harrison, Odile B

Impact of COVID-19 on national surveillance of norovirus in England and potential risk of increased disease activity in 2021. (2021) Douglas, A; Sandmann, FG; Allen, DJ; Celma, CC; Beard, S; Larkin, L

TbSAP is a novel chromatin protein repressing metacyclic variant surface glycoprotein expression sites in bloodstream form Trypanosoma brucei. (2021) Davies, Carys; Ooi, Cher-Pheng; Sioutas, Georgios; Hall, Belinda S; Sidhu, Haneesh; Butter, Falk; Alsford, Sam; Wickstead, Bill; Rudenko, Gloria

Can what have we learnt about BCG vaccination in the last 20 years help us to design a better tuberculosis vaccine? (2021) Dockrell, Hazel M; Butkeviciute, Egle

Extracellular DNA, cell surface proteins and c-di-GMP promote biofilm formation in Clostridioides difficile. (2021) Dawson, Lisa F; Peltier, Johann; Hall, Catherine L; Harrison, Mark A; Derakhshan, Maria; Shaw, Helen A; Fairweather, Neil F; Wren, Brendan W

Costs and outcomes of active and passive case detection for visceral leishmaniasis (Kala-Azar) to inform elimination strategies in Bihar, India. (2021) Dial, Natalie J; Medley, Graham F; Croft, Simon L; Mahapatra, Tanmay; Priyamvada, Khushbu; Sinha, Bikas; Palmer, Lucy; Terris-Prestholt, Fern

Studying accelerated cardiovascular ageing in Russian adults through a novel deep-learning ECG biomarker. (2021) Diez Benavente, Ernest; Jimenez-Lopez, Francisco; Attia, Zachi I; Malyutina, Sofia; Kudryavtsev, Alexander; Ryabikov, Andrew; Friedman, Paul A; Kapa, Suraj; Voevoda, Michael; Perel, Pablo; Schirmer, Henrik; Hughes, Alun D; Clark, Taane G; Leon, David A

A position statement and practical guide to the use of particulate filtering facepiece respirators (N95, FFP2, or equivalent) for South African health workers exposed to respiratory pathogens including Mycobacterium tuberculosis and SARS-CoV-2. (2021) Dheda, K; Charalambous, S; Karat, AS; von Delft, A; Lalloo, UG; van Zyl Smit, R; Perumal, R; Allwood, BW; Esmail, A; Wong, ML; Duse, AG; Richards, G; Feldman, C; Mer, M; Nyamande, K; Lalla, U; Koegelenberg, CFN; Venter, F; Dawood, H; Adams, S; Ntusi, NAB; van der Westhuizen, H-M; Moosa, M-YS; Martinson, NA; Moultrie, H; Nel, J; Hausler, H; Preiser, W; Lasersohn, L; Zar, HJ; Churchyard, GJ

E

Klebsiella pneumoniae and Colistin Susceptibility Testing: Performance Evaluation for Broth Microdilution, Agar Dilution and Minimum Inhibitory Concentration Test Strips and Impact of the "Skipped Well" Phenomenon. (2021) Elias, Rita; Melo-Cristino, José; Lito, Luís; Pinto, Margarida; Gonçalves, Luísa; Campino, Susana; Clark, Taane G; Duarte, Aida; Perdigão, João

SNPPar: identifying convergent evolution and other homoplasies from microbial whole-genome alignments. (2021) Edwards, David J; Duchene, Sebastián; Pope, Bernard; Holt, Kathryn E

Challenges and opportunities for use of long-lasting insecticidal nets to prevent malaria during overnight travel in Uganda: a qualitative study. (2021) Ekusai-Sebatta, Deborah; Arinaitwe, Emmanuel; Mpimbaza, Arthur; Nankabirwa, Joaniter I; Drakeley, Chris; Rosenthal, Philip J; Staedke, Sarah G; Muyinda, Herbert

Prevalence and seroprevalence of Plasmodium infection in Myanmar reveals highly heterogeneous transmission and a large hidden reservoir of infection. (2021) Edwards, Hannah M; Dixon, Ruth; Zegers de Beyl, Celine; Celhay, Olivier; Rahman, Mousumi; Myint Oo, Moe; Lwin, Thandar; Lin, Zaw; San, Thiri; Thwe Han, Kay; Myaing Nyunt, Myaing; Plowe, Christopher; Stresman, Gillian; Hall, Tom; Drakeley, Chris; Hamade, Prudence; Aryal, Siddhi; Roca-Feltrer, Arantxa; Hlaing, Thaung; Thi, Aung

Efficacy of ChAdOx1 nCoV-19 (AZD1222) vaccine against SARS-CoV-2 variant of concern 202012/01 (B.1.1.7): an exploratory analysis of a randomised controlled trial. (2021) Emary, Katherine RW; Golubchik, Tanya; Aley, Parvinder K; Ariani, Cristina V; Angus, Brian; Bibi, Sagida; Blane, Beth; Bonsall, David; Cicconi, Paola; Charlton, Sue; Clutterbuck, Elizabeth A; Collins, Andrea M; Cox, Tony; Darton, Thomas C; Dold, Christina; Douglas, Alexander D; Duncan, Christopher JA; Ewer, Katie J; Flaxman, Amy L; Faust, Saul N; Ferreira, Daniela M; Feng, Shuo; Finn, Adam; Folegatti, Pedro M; Fuskova, Michelle; Galiza, Eva; Goodman, Anna L; Green, Catherine M; Green, Christopher A; Greenland, Melanie; Hallis, Bassam; Heath, Paul T; Hay, Jodie; Hill, Helen C; Jenkin, Daniel; Kerridge, Simon; Lazarus, Rajeka; Libri, Vincenzo; Lillie, Patrick J; Ludden, Catherine; Marchevsky, Natalie G; Minassian, Angela M; McGregor, Alastair C; Mujadidi, Yama F; Phillips, Daniel J; Plested, Emma; Pollock, Katrina M; Robinson, Hannah; Smith, Andrew; Song, Rinn; Snape, Matthew D; Sutherland, Rebecca K; Thomson, Emma C; Toshner, Mark; Turner, David PJ; Vekemans, Johan; Villafana, Tonya L; Williams, Christopher J; Hill, Adrian VS; Lambe, Teresa; Gilbert, Sarah C; Voysey, Merryn; Ramasamy, Maheshi N; Pollard, Andrew J; COVID-19 Genomics UK consortium; AMPHEUS Project; Oxford COVID-19 Vaccine Trial Group

Revisiting Campylobacter jejuni Virulence and Fitness Factors: Role in Sensing, Adapting, and Competing. (2021) Elmi, Abdi; Nasher, Fauzy; Dorrell, Nick; Wren, Brendan; Gundogdu, Ozan

Impact of Intermediate Hyperglycemia and Diabetes on Immune Dysfunction in Tuberculosis. (2021) Eckold, Clare; Kumar, Vinod; Weiner, January; Alisjahbana, Bachti; Riza, Anca-Lelia; Ronacher, Katharina; Coronel, Jorge; Kerry-Barnard, Sarah; Malherbe, Stephanus T; Kleynhans, Leanie; Stanley, Kim; Ruslami, Rovina; Ioana, Mihai; Ugarte-Gil, Cesar; Walzl, Gerhard; van Crevel, Reinout; Wijmenga, Cisca; Critchley, Julia A; Dockrell, Hazel M; Cliff, Jacqueline M; TANDEM consortium

F

A nationwide genomic study of clinical Klebsiella pneumoniae in Norway 2001-15: introduction and spread of ESBLs facilitated by clonal groups CG15 and CG307. (2021) Fostervold, Aasmund; Hetland, Marit AK; Bakksjø, Ragna; Bernhoff, Eva; Holt, Kathryn E; Samuelsen, Ørjan; Simonsen, Gunnar Skov; Sundsfjord, Arnfinn; Wyres, Kelly L; Löhr, Iren Høyland; Norwegian Study Group on Klebsiella pneumoniae

Emergent canine visceral leishmaniasis in Argentina: Comparative diagnostics and relevance to proliferation of human disease. (2021) Fujisawa, Kyoko; Silcott-Niles, Charlotte; Simonson, Poppy; Lamattina, Daniela; Humeres, Cristian A; Bhattacharyya, Tapan; Mertens, Pascal; Thunissen, Caroline; O'Rourke, Victoria; Pańczuk, Magdalena; Whitworth, James A; Salomón, Oscar Daniel; Miles, Michael A

Practices and Challenges of Veterinary Paraprofessionals in Regards to Antimicrobial Use and Resistance in Animals in Dar Es Salaam, Tanzania. (2021) Frumence, Gasto; Mboera, Leonard EG; Sindato, Calvin; Durrance-Bagale, Anna; Jung, Anne-Sophie; Mshana, Stephen E; Clark, Taane G; Legido-Quigley, Helena; Matee, Mecky I

gbpA and chiA genes are not uniformly distributed amongst diverse Vibrio cholerae. (2021) Fennell, Thea G; Blackwell, Grace A; Thomson, Nicholas R; Dorman, Matthew J

Policy actors and human and animal health practitioners' perceptions of antimicrobial use and resistance in Tanzania: A qualitative study. (2021) Frumence, Gasto; Mboera, Leonard EG; Katale, Bugwesa Z; Sindato, Calvin; Kimera, Sharadhuli; Durrance-Bagale, Anna; Mshana, Stephen E; Clark, Taane G; Rweyemamu, Mark M; Legido-Quigley, Helena; Matee, Mecky

The Governance and Implementation of the National Action Plan on Antimicrobial Resistance in Tanzania: A Qualitative Study. (2021) Frumence, Gasto; Mboera, Leonard EG; Sindato, Calvin; Katale, Bugwesa Z; Kimera, Sharadhuli; Metta, Emmy; Durrance-Bagale, Anna; Jung, Anne-Sophie; Mshana, Stephen E; Clark, Taane G; Rweyemamu, Mark; Legido-Quigley, Helena; Matee, Mecky IN

Achieving global malaria eradication in changing landscapes. (2021) Fornace, Kimberly M; Diaz, Adriana V; Lines, Jo; Drakeley, Chris J

Genomic diversity of Escherichia coli from healthy children in rural Gambia. (2021) Foster-Nyarko, Ebenezer; Alikhan, Nabil-Fareed; Ikumapayi, Usman N; Sarwar, Golam; Okoi, Catherine; Tientcheu, Peggy-Estelle Maguiagueu; Defernez, Marianne; O'Grady, Justin; Antonio, Martin; Pallen, Mark J

G

Probing Differences in Gene Essentiality Between the Human and Animal Adapted Lineages of the Mycobacterium tuberculosis Complex Using TnSeq. (2021) Gibson, Amanda J; Passmore, Ian J; Faulkner, Valwynne; Xia, Dong; Nobeli, Irene; Stiens, Jennifer; Willcocks, Sam; Clark, Taane G; Sobkowiak, Ben; Werling, Dirk; Villarreal-Ramos, Bernardo; Wren, Brendan W; Kendall, Sharon L

Harnessing the Potential of miRNAs in Malaria Diagnostic and Prevention. (2021) Gupta, Himanshu; Wassmer, Samuel C

Whole genome sequencing reveals large deletions and other loss of function mutations in Mycobacterium tuberculosis drug resistance genes. (2021) Gomes, Laura C; Campino, Susana; Marinho, Cláudio RF; Clark, Taane G; Phelan, Jody E

No time to die: An in-depth analysis of James Bond's exposure to infectious agents. (2021) Graumans, Wouter; Stone, William JR; Bousema, Teun

Genetic diversity of candidate loci linked to Mycobacterium tuberculosis resistance to bedaquiline, delamanid and pretomanid. (2021) Gómez-González, Paula J; Perdigao, Joao; Gomes, Pedro; Puyen, Zully M; Santos-Lazaro, David; Napier, Gary; Hibberd, Martin L; Viveiros, Miguel; Portugal, Isabel; Campino, Susana; Phelan, Jody E; Clark, Taane G

Inferior T cell immunogenicity of a Plasmodium berghei model liver stage antigen expressed throughout pre-erythrocytic maturation. (2021) Gibbins, Matthew P; Müller, Katja; Matuschewski, Kai; Silvie, Olivier; Hafalla, Julius Clemence R

GenTB: A user-friendly genome-based predictor for tuberculosis resistance powered by machine learning. (2021) Gröschel, Matthias I; Owens, Martin; Freschi, Luca; Vargas, Roger; Marin, Maximilian G; Phelan, Jody; Iqbal, Zamin; Dixit, Avika; Farhat, Maha R

The discovery of a novel series of compounds with single-dose efficacy against juvenile and adult Schistosoma species. (2021) Gardner, J Mark F; Mansour, Nuha R; Bell, Andrew S; Helmby, Helena; Bickle, Quentin

Plasma levels of hsa-miR-3158-3p microRNA on admission correlate with MRI findings and predict outcome in cerebral malaria. (2021) Gupta, Himanshu; Sahu, Praveen K; Pattnaik, Rajyabardhan; Mohanty, Anita; Majhi, Megharay; Mohanty, Akshaya K; Pirpamer, Lukas; Hoffmann, Angelika; Mohanty, Sanjib; Wassmer, Samuel C

Detection of plasmid contigs in draft genome assemblies using customized Kraken databases. (2021) Gomi, Ryota; Wyres, Kelly L; Holt, Kathryn E

Extensive microbial diversity within the chicken gut microbiome revealed by metagenomics and culture. (2021) Gilroy, Rachel; Ravi, Anuradha; Getino, Maria; Pursley, Isabella; Horton, Daniel L; Alikhan, Nabil-Fareed; Baker, Dave; Gharbi, Karim; Hall, Neil; Watson, Mick; Adriaenssens, Evelien M; Foster-Nyarko, Ebenezer; Jarju, Sheikh; Secka, Arss; Antonio, Martin; Oren, Aharon; Chaudhuri, Roy R; La Ragione, Roberto; Hildebrand, Falk; Pallen, Mark J

Dysbiosis in the Development of Type I Diabetes and Associated Complications: From Mechanisms to Targeted Gut Microbes Manipulation Therapies. (2021) Gradisteanu Pircalabioru, Gratiela; Corcionivoschi, Nicolae; Gundogdu, Ozan; Chifiriuc, Mariana-Carmen; Marutescu, Luminita Gabriela; Ispas, Bogdan; Savu, Octavian

Identification of Reduced Host Transcriptomic Signatures for Tuberculosis Disease and Digital PCR-Based Validation and Quantification. (2021) Gliddon, Harriet D; Kaforou, Myrsini; Alikian, Mary; Habgood-Coote, Dominic; Zhou, Chenxi; Oni, Tolu; Anderson, Suzanne T; Brent, Andrew J; Crampin, Amelia C; Eley, Brian; Heyderman, Robert; Kern, Florian; Langford, Paul R; Ottenhoff, Tom HM; Hibberd, Martin L; French, Neil; Wright, Victoria J; Dockrell, Hazel M; Coin, Lachlan J; Wilkinson, Robert J; Levin, Michael

Corrigendum to 'A novel multiplex qPCR assay for detection of Plasmodium falciparum with histidine-rich protein 2 and 3 (pfhrp2 and pfhrp3) deletions in polyclonal infections'. (2021) Grignard, Lynn; Nolder, Debbie; Sepulveda, Nuno; Berhane, Araia; Mihreteab, Selam; Kaaya, Robert; Phelan, Jody; Moser, Kara; van Schalkwyk, Donelly A; Campino, Susana; Parr, Jonathan B; Juliano, Jonathan J; Chiodini, Peter; Cunningham, Jane; Sutherland, Colin J; Drakeley, Chris; Beshir, Khalid B

Plasma MicroRNA Profiling of Plasmodium falciparum Biomass and Association with Severity of Malaria Disease. (2021) Gupta, Himanshu; Rubio, Mercedes; Sitoe, Antonio; Varo, Rosauro; Cisteró, Pau; Madrid, Lola; Cuamba, Inocencia; Jimenez, Alfons; Martiáñez-Vendrell, Xavier; Barrios, Diana; Pantano, Lorena; Brimacombe, Allison; Bustamante, Mariona; Bassat, Quique; Mayor, Alfredo

H

Addressing parachute research and removing barriers for LMIC researchers in Microbial Genomics. (2021) Heinz, Eva; Holt, Kathryn E; Meehan, Conor J; Sheppard, Samuel K

The Mycobacterium tuberculosis sRNA F6 Modifies Expression of Essential Chaperonins, GroEL2 and GroES. (2021) Houghton, Joanna; Rodgers, Angela; Rose, Graham; D'Halluin, Alexandre; Kipkorir, Terry; Barker, Declan; Waddell, Simon J; Arnvig, Kristine B

Different evolutionary trends form the twilight zone of the bacterial pan-genome. (2021) Horesh, Gal; Taylor-Brown, Alyce; McGimpsey, Stephanie; Lassalle, Florent; Corander, Jukka; Heinz, Eva; Thomson, Nicholas R

Global population structure and genotyping framework for genomic surveillance of the major dysentery pathogen, Shigella sonnei. (2021) Hawkey, Jane; Paranagama, Kalani; Baker, Kate S; Bengtsson, Rebecca J; Weill, François-Xavier; Thomson, Nicholas R; Baker, Stephen; Cerdeira, Louise; Iqbal, Zamin; Hunt, Martin; Ingle, Danielle J; Dallman, Timothy J; Jenkins, Claire; Williamson, Deborah A; Holt, Kathryn E

Identification of novel locus associated with coronary artery aneurysms and validation of loci for susceptibility to Kawasaki disease. (2021) Hoggart, Clive; Shimizu, Chisato; Galassini, Rachel; Wright, Victoria J; Shailes, Hannah; Bellos, Evan; Herberg, Jethro A; Pollard, Andrew J; O'Connor, Daniel; Choi, Shing Wan; Seaby, Eleanor G; Menikou, Stephanie; Hibberd, Martin; Sallah, Neneh; Burgner, David; Brogan, Paul; Patel, Harsita; Kim, Jihoon; Tremoulet, Adriana H; Salo, Eeva; van Stijn, Diana; Kuijpers, Taco; Burns, Jane C; Levin, Michael; International Kawasaki Disease Genetics Consortium; UK Kawasaki Disease Genetics Consortium; EUCLIDS Consortium

Parasites and tissue microenvironment. (2021) Helmby, Helena; Hafalla, Julius Clemence

The epidemiology and detectability of asymptomatic plasmodium vivax and plasmodium falciparum infections in low, moderate and high transmission settings in Ethiopia. (2021) Hailemeskel, Elifaged; Tebeje, Surafel K; Behaksra, Sinknesh W; Shumie, Girma; Shitaye, Getasew; Keffale, Migbaru; Chali, Wakweya; Gashaw, Abrham; Ashine, Temesgen; Drakeley, Chris; Bousema, Teun; Gadisa, Endalamaw; Tadesse, Fitsum G

A comprehensive and high-quality collection of Escherichia coli genomes and their genes. (2021) Horesh, Gal; Blackwell, Grace A; Tonkin-Hill, Gerry; Corander, Jukka; Heinz, Eva; Thomson, Nicholas R

Conservation of S20 as an Ineffective and Disposable IFNγ-Inducing Determinant of Plasmodium Sporozoites Indicates Diversion of Cellular Immunity. (2021) Hon, Calvin; Friesen, Johannes; Ingmundson, Alyssa; Scheppan, Diana; Hafalla, Julius CR; Müller, Katja; Matuschewski, Kai

Combining reverse genetics and live microscopy to dissect Plasmodium knowlesi invasion of red blood cells. (2021) Hart, Melissa

Screening for Mycobacterium tuberculosis Infection Using Beijing/K Strain-Specific Peptides in a School Outbreak Cohort. (2021) Hong, Ji Young; Kim, Ahreum; Park, So Yeong; Cho, Sang-Nae; Dockrell, Hazel M; Hur, Yun-Gyoung

J

Small is beautiful: virus-like particles as vaccines. (2021) Jones, Ian; Roy, Polly

Association of common TMPRSS6 and TF gene variants with hepcidin and iron status in healthy rural Gambians. (2021) Jallow, Momodou W; Campino, Susana; Prentice, Andrew M; Cerami, Carla

Multicentre stepped-wedge cluster randomised controlled trial of an antimicrobial stewardship programme in residential aged care: protocol for the START trial. (2021) Jokanovic, Natali; Haines, Terry; Cheng, Allen C; Holt, Kathryn E; Hilmer, Sarah N; Jeon, Yun-Hee; Stewardson, Andrew J; Stuart, Rhonda L; Spelman, Tim; Peel, Trisha N; Peleg, Anton Y; START Trial Group

Common Variants in the TMPRSS6 Gene Alter Hepcidin but not Plasma Iron in Response to Oral Iron in Healthy Gambian Adults: A Recall-by-Genotype Study. (2021) Jallow, Momodou W; Campino, Susana; Saidykhan, Alasana; Prentice, Andrew M; Cerami, Carla

'You're only there on the phone'? A qualitative exploration of community, affect and agential capacity in HIV self-testing using a smartphone app. (2021) Janssen, Ricky; Engel, Nora; Pant Pai, Nitika; Esmail, Aliasgar; Dheda, Keertan; Thomas, Réjean; Krumeich, Anja

The impact of single nucleotide polymorphisms in human genes that regulate hepcidin and iron on oral iron absorption and the risk of anaemia in Africans. (2021) Jallow, MW

Molecular Epidemiology of Group A Streptococcus Infections in The Gambia. (2021) Jabang, Sona; Erhart, Annette; Darboe, Saffiatou; Baldeh, Aru-Kumba; Delforge, Valerie; Watson, Gabriella; Foster-Nyarko, Ebenezer; Salaudeen, Rasheed; Lawal, Bolarinde; Mackenzie, Grant; Botteaux, Anne; Antonio, Martin; Smeesters, Pierre R; On Behalf Of The Mrcg StrepA Study Group

Sputnik V COVID-19 vaccine candidate appears safe and effective. (2021) Jones, Ian; Roy, Polly

A recall-by-genotype study on polymorphisms in the TMPRSS6 gene and oral iron absorption: a study protocol. (2021) Jallow, Momodou W; Campino, Susana; Prentice, Andrew M; Cerami, Carla

K

TLR9 signalling inhibits Plasmodium liver infection by macrophage activation. (2021) Kordes, Maximilian; Ormond, Louise; Rausch, Sebastian; Matuschewski, Kai; Hafalla, Julius Clemence R

Multiple introductions of multidrug-resistant typhoid associated with acute infection and asymptomatic carriage, Kenya. (2021) Kariuki, Samuel; Dyson, Zoe A; Mbae, Cecilia; Ngetich, Ronald; Kavai, Susan M; Wairimu, Celestine; Anyona, Stephen; Gitau, Naomi; Onsare, Robert Sanaya; Ongandi, Beatrice; Duchene, Sebastian; Ali, Mohamed; Clemens, John David; Holt, Kathryn E; Dougan, Gordon

2021 Taxonomic update of phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales. (2021) Kuhn, Jens H; Adkins, Scott; Agwanda, Bernard R; Al Kubrusli, Rim; Alkhovsky, Sergey V; Amarasinghe, Gaya K; Avšič-Županc, Tatjana; Ayllón, María A; Bahl, Justin; Balkema-Buschmann, Anne; Ballinger, Matthew J; Basler, Christopher F; Bavari, Sina; Beer, Martin; Bejerman, Nicolas; Bennett, Andrew J; Bente, Dennis A; Bergeron, Éric; Bird, Brian H; Blair, Carol D; Blasdell, Kim R; Blystad, Dag-Ragnar; Bojko, Jamie; Borth, Wayne B; Bradfute, Steven; Breyta, Rachel; Briese, Thomas; Brown, Paul A; Brown, Judith K; Buchholz, Ursula J; Buchmeier, Michael J; Bukreyev, Alexander; Burt, Felicity; Büttner, Carmen; Calisher, Charles H; Cao, Mengji; Casas, Inmaculada; Chandran, Kartik; Charrel, Rémi N; Cheng, Qi; Chiaki, Yuya; Chiapello, Marco; Choi, Il-Ryong; Ciuffo, Marina; Clegg, J Christopher S; Crozier, Ian; Dal Bó, Elena; de la Torre, Juan Carlos; de Lamballerie, Xavier; de Swart, Rik L; Debat, Humberto; Dheilly, Nolwenn M; Di Cicco, Emiliano; Di Paola, Nicholas; Di Serio, Francesco; Dietzgen, Ralf G; Digiaro, Michele; Dolnik, Olga; Drebot, Michael A; Drexler, J Felix; Dundon, William G; Duprex, W Paul; Dürrwald, Ralf; Dye, John M; Easton, Andrew J; Ebihara, Hideki; Elbeaino, Toufic; Ergünay, Koray; Ferguson, Hugh W; Fooks, Anthony R; Forgia, Marco; Formenty, Pierre BH; Fránová, Jana; Freitas-Astúa, Juliana; Fu, Jingjing; Fürl, Stephanie; Gago-Zachert, Selma; Gāo, George Fú; García, María Laura; García-Sastre, Adolfo; Garrison, Aura R; Gaskin, Thomas; Gonzalez, Jean-Paul J; Griffiths, Anthony; Goldberg, Tony L; Groschup, Martin H; Günther, Stephan; Hall, Roy A; Hammond, John; Han, Tong; Hepojoki, Jussi; Hewson, Roger; Hong, Jiang; Hong, Ni; Hongo, Seiji; Horie, Masayuki; Hu, John S; Hu, Tao; Hughes, Holly R; Hüttner, Florian; Hyndman, Timothy H; Ilyas, M; Jalkanen, Risto; Jiāng, Dàohóng; Jonson, Gilda B; Junglen, Sandra; Kadono, Fujio; Kaukinen, Karia H; Kawate, Michael; Klempa, Boris; Klingström, Jonas; Kobinger, Gary; Koloniuk, Igor; Kondō, Hideki; Koonin, Eugene V; Krupovic, Mart; Kubota, Kenji; Kurath, Gael; Laenen, Lies; Lambert, Amy J; Langevin, Stanley L; Lee, Benhur; Lefkowitz, Elliot J; Leroy, Eric M; Li, Shaorong; Li, Longhui; Lǐ, Jiànróng; Liu, Huazhen; Lukashevich, Igor S; Maes, Piet; de Souza, William Marciel; Marklewitz, Marco; Marshall, Sergio H; Marzano, Shin-Yi L; Massart, Sebastien; McCauley, John W; Melzer, Michael; Mielke-Ehret, Nicole; Miller, Kristina M; Ming, Tobi J; Mirazimi, Ali; Mordecai, Gideon J; Mühlbach, Hans-Peter; Mühlberger, Elke; Naidu, Rayapati; Natsuaki, Tomohide; Navarro, José A; Netesov, Sergey V; Neumann, Gabriele; Nowotny, Norbert; Nunes, Márcio RT; Olmedo-Velarde, Alejandro; Palacios, Gustavo; Pallás, Vicente; Pályi, Bernadett; Papa, Anna; Paraskevopoulou, Sofia; Park, Adam C; Parrish, Colin R; Patterson, David A; Pauvolid-Corrêa, Alex; Pawęska, Janusz T; Payne, Susan; Peracchio, Carlotta; Pérez, Daniel R; Postler, Thomas S; Qi, Liying; Radoshitzky, Sheli R; Resende, Renato O; Reyes, Carina A; Rima, Bertus K; Luna, Gabriel Robles; Romanowski, Víctor; Rota, Paul; Rubbenstroth, Dennis; Rubino, Luisa; Runstadler, Jonathan A; Sabanadzovic, Sead; Sall, Amadou Alpha; Salvato, Maria S; Sang, Rosemary; Sasaya, Takahide; Schulze, Angela D; Schwemmle, Martin; Shi, Mang; Shí, Xiǎohóng; Shí, Zhènglì; Shimomoto, Yoshifumi; Shirako, Yukio; Siddell, Stuart G; Simmonds, Peter; Sironi, Manuela; Smagghe, Guy; Smither, Sophie; Song, Jin-Won; Spann, Kirsten; Spengler, Jessica R; Stenglein, Mark D; Stone, David M; Sugano, Jari; Suttle, Curtis A; Tabata, Amy; Takada, Ayato; Takeuchi, Shigeharu; Tchouassi, David P; Teffer, Amy; Tesh, Robert B; Thornburg, Natalie J; Tomitaka, Yasuhiro; Tomonaga, Keizō; Tordo, Noël; Torto, Baldwyn; Towner, Jonathan S; Tsuda, Shinya; Tu, Changchun; Turina, Massimo; Tzanetakis, Ioannis E; Uchida, Janice; Usugi, Tomio; Vaira, Anna Maria; Vallino, Marta; van den Hoogen, Bernadette; Varsani, Arvind; Vasilakis, Nikos; Verbeek, Martin; von Bargen, Susanne; Wada, Jiro; Wahl, Victoria; Walker, Peter J; Wang, Lin-Fa; Wang, Guoping; Wang, Yanxiang; Wang, Yaqin; Waqas, Muhammad; Wèi, Tàiyún; Wen, Shaohua; Whitfield, Anna E; Williams, John V; Wolf, Yuri I; Wu, Jiangxiang; Xu, Lei; Yanagisawa, Hironobu; Yang, Caixia; Yang, Zuokun; Zerbini, F Murilo; Zhai, Lifeng; Zhang, Yong-Zhen; Zhang, Song; Zhang, Jinguo; Zhang, Zhe; Zhou, Xueping

Local association of Trypanosoma cruzi chronic infection foci and enteric neuropathic lesions at the tissue micro-domain scale. (2021) Khan, Archie A; Langston, Harry C; Costa, Fernanda C; Olmo, Francisco; Taylor, Martin C; McCann, Conor J; Kelly, John M; Lewis, Michael D

Sequential Vaccination With Heterologous Acinetobacter baumannii Strains Induces Broadly Reactive Antibody Responses. (2021) Kamuyu, Gathoni; Suen Cheng, Yat; Willcocks, Sam; Kewcharoenwong, Chidchamai; Kiratisin, Pattarachai; Taylor, Peter W; Wren, Brendan W; Lertmemongkolchai, Ganjana; Stabler, Richard A; Brown, Jeremy

Author Correction: Characterization of rifampicin-resistant Mycobacterium tuberculosis in Khyber Pakhtunkhwa, Pakistan. (2021) Khan, Anwar Sheed; Phelan, Jody E; Khan, Muhammad Tahir; Ali, Sajid; Qasim, Muhammad; Napier, Gary; Campino, Susana; Ahmad, Sajjad; Cabral-Marques, Otavio; Zhang, Shulin; Rahman, Hazir; Wei, Dong-Qing; Clark, Taane G; Khan, Taj Ali

Characterization of rifampicin-resistant Mycobacterium tuberculosis in Khyber Pakhtunkhwa, Pakistan. (2021) Khan, Anwar Sheed; Phelan, Jody E; Khan, Muhammad Tahir; Ali, Sajid; Qasim, Muhammad; Napier, Gary; Campino, Susana; Ahmad, Sajjad; Cabral-Marques, Otavio; Zhang, Shulin; Rahman, Hazir; Wei, Dong-Qing; Clark, Taane G; Khan, Taj Ali

A blood RNA transcriptome signature for COVID-19. (2021) Kwan, Philip Kam Weng; Cross, Gail B; Naftalin, Claire M; Ahidjo, Bintou A; Mok, Chee Keng; Fanusi, Felic; Permata Sari, Intan; Chia, Siok Ching; Kumar, Shoban Krishna; Alagha, Rawan; Tham, Sai Meng; Archuleta, Sophia; Sessions, October M; Hibberd, Martin L; Paton, Nicholas I

The impact of genomics on precision public health: beyond the pandemic. (2021) Khoury, Muin J; Holt, Kathryn E

Additional Feeding Reveals Differences in Immune Recognition and Growth of Plasmodium Parasites in the Mosquito Host. (2021) Kwon, Hyeogsun; Simões, Maria L; Reynolds, Rebekah A; Dimopoulos, George; Smith, Ryan C

The Role of Ultrasensitive Molecular Methods for Detecting Malaria-The Broader Perspective. (2021) Kamaliddin, Claire; Sutherland, Colin J; Houze, Sandrine; Cottrell, Gilles; Briand, Valerie; Castaneda Mogollon, Daniel; Pillai, Dylan R

Complete genome characterization of human noroviruses allows comparison of minor alleles during acute and chronic infections. (2021) Kelly, Daniel; Jere, Khuzwayo C; Darby, Alistair C; Allen, David J; Iturriza-Gómara, Miren

De Novo Cobalamin Biosynthesis, Transport, and Assimilation and Cobalamin-Mediated Regulation of Methionine Biosynthesis in Mycobacterium smegmatis. (2021) Kipkorir, Terry; Mashabela, Gabriel T; de Wet, Timothy J; Koch, Anastasia; Dawes, Stephanie S; Wiesner, Lubbe; Mizrahi, Valerie; Warner, Digby F

Antimicrobial resistance and COVID-19: Intersections and implications. (2021) Knight, Gwenan M; Glover, Rebecca E; McQuaid, C Finn; Olaru, Ioana D; Gallandat, Karin; Leclerc, Quentin J; Fuller, Naomi M; Willcocks, Sam J; Hasan, Rumina; van Kleef, Esther; Chandler, Clare Ir

Xpert MTB/RIF Ultra and Xpert MTB/RIF assays for extrapulmonary tuberculosis and rifampicin resistance in adults. (2021) Kohli, Mikashmi; Schiller, Ian; Dendukuri, Nandini; Yao, Mandy; Dheda, Keertan; Denkinger, Claudia M; Schumacher, Samuel G; Steingart, Karen R

The Multifaceted Role of Protein Phosphatase 1 in Plasmodium. (2021) Khalife, Jamal; Fréville, Aline; Gnangnon, Bénédicte; Pierrot, Christine

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Emerging technologies and infection models in cellular microbiology. (2021) López-Jiménez, Ana Teresa; Mostowy, Serge

Editorial: Nucleic Acid-Associated Inflammation. (2021) Laguette, Nadine; Langevin, Christelle; Olagnier, David; Torraca, Vincenzo; Vanpouille-Box, Claire; Verrier, Eloi R

Salivary DNA Loads for Human Herpesviruses 6 and 7 Are Correlated With Disease Phenotype in Myalgic Encephalomyelitis/Chronic Fatigue Syndrome. (2021) Lee, Ji-Sook; Lacerda, Eliana M; Nacul, Luis; Kingdon, Caroline C; Norris, Jasmin; O'Boyle, Shennae; Roberts, Chrissy H; Palla, Luigi; Riley, Eleanor M; Cliff, Jacqueline M

Salivary DNA loads for human herpes viruses 6 and 7 are correlated with disease phenotype in Myalgic Encephalomyelitis/ Chronic Fatigue Syndrome. (2021) Lee, Ji-Sook; Lacerda, Eliana M; Nacul, Luis; Kingdon, Caroline C; Norris, Jasmin; O’Boyle, Shennae; Roberts, Chrissy H; Palla, Luigi; Riley, Eleanor M; Cliff, Jacqueline M

Mechanistic insight into bacterial entrapment by septin cage reconstitution. (2021) Lobato-Márquez, Damián; Xu, Jingwei; Güler, Gizem Özbaykal; Ojiakor, Adaobi; Pilhofer, Martin; Mostowy, Serge

A genomic surveillance framework and genotyping tool for Klebsiella pneumoniae and its related species complex. (2021) Lam, Margaret MC; Wick, Ryan R; Watts, Stephen C; Cerdeira, Louise T; Wyres, Kelly L; Holt, Kathryn E

Defining nosocomial transmission of Escherichia coli and antimicrobial resistance genes: a genomic surveillance study. (2021) Ludden, Catherine; Coll, Francesc; Gouliouris, Theodore; Restif, Olivier; Blane, Beth; Blackwell, Grace A; Kumar, Narender; Naydenova, Plamena; Crawley, Charles; Brown, Nicholas M; Parkhill, Julian; Peacock, Sharon J

A synbiotic intervention modulates meta-omics signatures of gut redox potential and acidity in elective caesarean born infants. (2021) Lay, Christophe; Chu, Collins Wenhan; Purbojati, Rikky Wenang; Acerbi, Enzo; Drautz-Moses, Daniela I; de Sessions, Paola Florez; Jie, Song; Ho, Eliza; Kok, Yee Jiun; Bi, Xuezhi; Chen, Shuwen; Mak, Shi Ya; Chua, Mei Chien; Goh, Anne EN; Chiang, Wen Chin; Rao, Rajeshwar; Chaithongwongwatthana, Surasith; Khemapech, Nipon; Chongsrisawat, Voranush; Martin, Rocio; JULIUS Study Group; Roeselers, Guus; Ho, Ying Swan; Hibberd, Martin L; Schuster, Stephan C; Knol, Jan

Detection of Rift Valley Fever Virus RNA in Formalin-Fixed Mosquitoes by In Situ Hybridization (RNAscope®). (2021) Lumley, Sarah; Hunter, Laura; Emery, Kirsty; Hewson, Roger; Fooks, Anthony R; Horton, Daniel L; Johnson, Nicholas

Peptidic boronic acids are potent cell-permeable inhibitors of the malaria parasite egress serine protease SUB1. (2021) Lidumniece, Elina; Withers-Martinez, Chrislaine; Hackett, Fiona; Collins, Christine R; Perrin, Abigail J; Koussis, Konstantinos; Bisson, Claudine; Blackman, Michael J; Jirgensons, Aigars

Direct Nanopore Sequencing of mRNA Reveals Landscape of Transcript Isoforms in Apicomplexan Parasites. (2021) Lee, V Vern; Judd, Louise M; Jex, Aaron R; Holt, Kathryn E; Tonkin, Christopher J; Ralph, Stuart A

Mercury methylation by metabolically versatile and cosmopolitan marine bacteria. (2021) Lin, Heyu; Ascher, David B; Myung, Yoochan; Lamborg, Carl H; Hallam, Steven J; Gionfriddo, Caitlin M; Holt, Kathryn E; Moreau, John W

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Evidence of Brain Alterations in Noncerebral Falciparum Malaria. (2021) Mohanty, Sanjib; Sahu, Praveen K; Pattnaik, Rajyabardhan; Majhi, Megharay; Maharana, Sameer; Bage, Jabamani; Mohanty, Akshaya; Mohanty, Anita; Bendszus, Martin; Patterson, Catriona; Gupta, Himanshu; Dondorp, Arjen M; Pirpamer, Lukas; Hoffmann, Angelika; Wassmer, Samuel C

The evolutionary history of Shigella flexneri serotype 6 in Asia. (2021) Mai, Si-Nguyen T; Bodhidatta, Ladaporn; Turner, Paul; Wangchuk, Sonam; Ha Thanh, Tuyen; Voong Vinh, Phat; Pham, Duy Thanh; Rabaa, Maia A; Thwaites, Guy E; Thomson, Nicholas R; Baker, Stephen; Chung The, Hao

Burden of enteric fever at three urban sites in Africa and Asia: a multicentre population-based study. (2021) Meiring, James E; Shakya, Mila; Khanam, Farhana; Voysey, Merryn; Phillips, Maile T; Tonks, Susan; Thindwa, Deus; Darton, Thomas C; Dongol, Sabina; Karkey, Abilasha; Zaman, K; Baker, Stephen; Dolecek, Christiane; Dunstan, Sarah J; Dougan, Gordon; Holt, Kathryn E; Heyderman, Robert S; Qadri, Firdausi; Pitzer, Virginia E; Basnyat, Buddha; Gordon, Melita A; Clemens, John; Pollard, Andrew J; STRATAA Study Group

Building Evidence on National Malaria Data Repository as a decision support tool of Use of Data for decision making in Malaria Programme, Nigeria. (2021) Maikore, IK

Characterization of Naturally Acquired Immunity to a Panel of Antigens Expressed in Mature P. falciparum Gametocytes. (2021) Muthui, Michelle K; Takashima, Eizo; Omondi, Brian R; Kinya, Christine; Muasya, William I; Nagaoka, Hikaru; Mwai, Kennedy W; Orindi, Benedict; Wambua, Juliana; Bousema, Teun; Drakeley, Chris; Blagborough, Andrew M; Marsh, Kevin; Bejon, Philip; Kapulu, Melissa C

DNDI-6148: A Novel Benzoxaborole Preclinical Candidate for the Treatment of Visceral Leishmaniasis. (2021) Mowbray, Charles E; Braillard, Stéphanie; Glossop, Paul A; Whitlock, Gavin A; Jacobs, Robert T; Speake, Jason; Pandi, Bharathi; Nare, Bakela; Maes, Louis; Yardley, Vanessa; Freund, Yvonne; Wall, Richard J; Carvalho, Sandra; Bello, Davide; Van den Kerkhof, Magali; Caljon, Guy; Gilbert, Ian H; Corpas-Lopez, Victoriano; Lukac, Iva; Patterson, Stephen; Zuccotto, Fabio; Wyllie, Susan

Assessing antibody decline after chemotherapy of early chronic Chagas disease patients. (2021) Murphy, Niamh; Cardinal, M Victoria; Bhattacharyya, Tapan; Enriquez, Gustavo F; Macchiaverna, Natalia P; Alvedro, Alejandra; Freilij, Héctor; Martinez de Salazar, Pablo; Molina, Israel; Mertens, Pascal; Gilleman, Quentin; Gürtler, Ricardo E; Miles, Michael A

Safety monitoring experience of single-low dose primaquine co-administered with artemether-lumefantrine among providers and patients in routine healthcare practice: a qualitative study in Eastern Tanzania. (2021) Mosha, Dominic; Kakolwa, Mwaka A; Mahende, Muhidin K; Masanja, Honorati; Abdulla, Salim; Drakeley, Chris; Gosling, Roland; Wamoyi, Joyce

Multivalent poultry vaccine development using Protein Glycan Coupling Technology. (2021) Mauri, Marta; Sannasiddappa, Thippeswamy H; Vohra, Prerna; Corona-Torres, Ricardo; Smith, Alexander A; Chintoan-Uta, Cosmin; Bremner, Abi; Terra, Vanessa S; Abouelhadid, Sherif; Stevens, Mark P; Grant, Andrew J; Cuccui, Jon; Wren, Brendan W; Glycoengineering of Veterinary Vaccines Consortium

Safety and immunogenicity of the ChAdOx1 nCoV-19 (AZD1222) vaccine against SARS-CoV-2 in people living with and without HIV in South Africa: an interim analysis of a randomised, double-blind, placebo-controlled, phase 1B/2A trial. (2021) Madhi, Shabir A; Koen, Anthonet L; Izu, Alane; Fairlie, Lee; Cutland, Clare L; Baillie, Vicky; Padayachee, Sherman D; Dheda, Keertan; Barnabas, Shaun L; Bhorat, Qasim Ebrahim; Briner, Carmen; Aley, Parvinder K; Bhikha, Sutika; Hermanus, Tandile; Horne, Elizea; Jose, Aylin; Kgagudi, Prudence; Lambe, Teresa; Masenya, Masebole; Masilela, Mduduzi; Mkhize, Nonhlanhla; Moultrie, Andrew; Mukendi, Christian K; Moyo-Gwete, Thandeka; Nana, Amit J; Nzimande, Ayanda; Patel, Faeezah; Rhead, Sarah; Taoushanis, Carol; Thombrayil, Asha; van Eck, Samuel; Voysey, Merryn; Villafana, Tonya L; Vekemans, Johan; Gilbert, Sarah C; Pollard, Andrew J; Moore, Penny L; Kwatra, Gaurav; Wits VIDA COVID team

The organisational response of a hospital critical care service to the COVID-19 pandemic: The Groote Schuur Hospital experience. (2021) Michell, WL; Joubert, IA; Peters, S; Fredericks, DL; Miller, MGA; Piercy, JL; Arnold-Day, C; Thomson, DA; van Zyl-Smit, RN; Calligaro, G; Strathie, G; Semple, PL; Hofmeyr, R; Peters, D; Dheda, K

The seasonal dynamics and biting behavior of potential Anopheles vectors of Plasmodium knowlesi in Palawan, Philippines. (2021) Malijan, Richard Paul B; Mechan, Frank; Braganza, Jessie C; Valle, Kristelle Mae R; Salazar, Ferdinand V; Torno, Majhalia M; Aure, Wilfredo E; Bacay, Brian A; Espino, Fe Esperanza; Torr, Stephen J; Fornace, Kimberly M; Drakeley, Chris; Ferguson, Heather M

Recurrent emergence of SARS-CoV-2 spike deletion H69/V70 and its role in the Alpha variant B.1.1.7. (2021) Meng, Bo; Kemp, Steven A; Papa, Guido; Datir, Rawlings; Ferreira, Isabella ATM; Marelli, Sara; Harvey, William T; Lytras, Spyros; Mohamed, Ahmed; Gallo, Giulia; Thakur, Nazia; Collier, Dami A; Mlcochova, Petra; COVID-19 Genomics UK (COG-UK) Consortium; Duncan, Lidia M; Carabelli, Alessandro M; Kenyon, Julia C; Lever, Andrew M; De Marco, Anna; Saliba, Christian; Culap, Katja; Cameroni, Elisabetta; Matheson, Nicholas J; Piccoli, Luca; Corti, Davide; James, Leo C; Robertson, David L; Bailey, Dalan; Gupta, Ravindra K

Schistosomiasis Drug Discovery in the Era of Automation and Artificial Intelligence. (2021) Moreira-Filho, José T; Silva, Arthur C; Dantas, Rafael F; Gomes, Barbara F; Souza Neto, Lauro R; Brandao-Neto, Jose; Owens, Raymond J; Furnham, Nicholas; Neves, Bruno J; Silva-Junior, Floriano P; Andrade, Carolina H

Meningococcal carriage in periods of high and low invasive meningococcal disease incidence in the UK: comparison of UKMenCar1-4 cross-sectional survey results. (2021) MacLennan, Jenny M; Rodrigues, Charlene MC; Bratcher, Holly B; Lekshmi, Aiswarya; Finn, Adam; Oliver, Jenny; Wootton, Mandy; Ray, Samantha; Cameron, Claire; Smith, Andrew; Heath, Paul T; Bartolf, Angela; Nolan, Tracey; Hughes, Stephen; Varghese, Anu; Snape, Matthew D; Sewell, Richard; Cunningham, Richard; Stolton, Alison; Kay, Carole; Palmer, Karen; Baxter, David; Suggitt, Debbie; Zipitis, Christos S; Pemberton, Nicola; Jolley, Keith A; Bray, James E; Harrison, Odile B; Ladhani, Shamez N; Pollard, Andrew J; Borrow, Raymond; Gray, Stephen J; Trotter, Caroline; Maiden, Martin CJ

Rapid Whole Genome Sequencing of Serotype K1 Hypervirulent Klebsiella pneumoniae from an Undocumented Chinese Migrant. (2021) Macleod, CK; Khokhar, FA; Warne, B; Wick, R; Butcher, R; Cassimon, B; Hayden, P; Holt, K; Török, ME

Low immunogenicity of malaria pre-erythrocytic stages can be overcome by vaccination. (2021) Müller, Katja; Gibbins, Matthew P; Roberts, Mark; Reyes-Sandoval, Arturo; Hill, Adrian VS; Draper, Simon J; Matuschewski, Kai; Silvie, Olivier; Hafalla, Julius Clemence R

The Epidemiology of Plasmodium falciparum Malaria in the Bijagos Islands of Guinea-Bissau. (2021) McGregor, David; Texeira da Silva, Eunice; Grignard, Lynn; Goncalves, Adriana; Vasileva, Hristina; Mabey, David; Last, Anna

Immune Responses Following BCG Immunization of Infants in Uganda and United Kingdom Are Similar for Purified Protein Derivative but Differ for Secretory Proteins of Mycobacterium tuberculosis. (2021) Mawa, Patrice A; Hasso-Agopsowicz, Mateusz; Lubyayi, Lawrence; Nabakooza, Grace; Nakibuule, Marjorie; Blitz, Rose; Dun, Li; Govind, Abha; Kaleebu, Pontiano; Webb, Emily L; Elliott, Alison M; Dockrell, Hazel M; Cose, Stephen; Smith, Steven G

Efficacy of the ChAdOx1 nCoV-19 Covid-19 Vaccine against the B.1.351 Variant. (2021) Madhi, Shabir A; Baillie, Vicky; Cutland, Clare L; Voysey, Merryn; Koen, Anthonet L; Fairlie, Lee; Padayachee, Sherman D; Dheda, Keertan; Barnabas, Shaun L; Bhorat, Qasim E; Briner, Carmen; Kwatra, Gaurav; Ahmed, Khatija; Aley, Parvinder; Bhikha, Sutika; Bhiman, Jinal N; Bhorat, As'ad E; du Plessis, Jeanine; Esmail, Aliasgar; Groenewald, Marisa; Horne, Elizea; Hwa, Shi-Hsia; Jose, Aylin; Lambe, Teresa; Laubscher, Matt; Malahleha, Mookho; Masenya, Masebole; Masilela, Mduduzi; McKenzie, Shakeel; Molapo, Kgaogelo; Moultrie, Andrew; Oelofse, Suzette; Patel, Faeezah; Pillay, Sureshnee; Rhead, Sarah; Rodel, Hylton; Rossouw, Lindie; Taoushanis, Carol; Tegally, Houriiyah; Thombrayil, Asha; van Eck, Samuel; Wibmer, Constantinos K; Durham, Nicholas M; Kelly, Elizabeth J; Villafana, Tonya L; Gilbert, Sarah; Pollard, Andrew J; de Oliveira, Tulio; Moore, Penny L; Sigal, Alex; Izu, Alane; NGS-SA Group; Wits-VIDA COVID Group

Validation and Optimization of Host Immunological Bio-Signatures for a Point-of-Care Test for TB Disease. (2021) Mutavhatsindi, Hygon; van der Spuy, Gian D; Malherbe, Stephanus T; Sutherland, Jayne S; Geluk, Annemieke; Mayanja-Kizza, Harriet; Crampin, Amelia C; Kassa, Desta; Howe, Rawleigh; Mihret, Adane; Sheehama, Jacob A; Nepolo, Emmanuel; Günther, Gunar; Dockrell, Hazel M; Corstjens, Paul LAM; Stanley, Kim; Walzl, Gerhard; Chegou, Novel N; AE-TBC ScreenTB Consortia

Evaluation of Host Serum Protein Biomarkers of Tuberculosis in sub-Saharan Africa. (2021) Morris, Thomas C; Hoggart, Clive J; Chegou, Novel N; Kidd, Martin; Oni, Tolu; Goliath, Rene; Wilkinson, Katalin A; Dockrell, Hazel M; Sichali, Lifted; Banda, Louis; Crampin, Amelia C; French, Neil; Walzl, Gerhard; Levin, Michael; Wilkinson, Robert J; Hamilton, Melissa S

An open dataset of Plasmodium falciparum genome variation in 7,000 worldwide samples. (2021) MalariaGEN; Ahouidi, Ambroise; Ali, Mozam; Almagro-Garcia, Jacob; Amambua-Ngwa, Alfred; Amaratunga, Chanaki; Amato, Roberto; Amenga-Etego, Lucas; Andagalu, Ben; Anderson, Tim JC; Andrianaranjaka, Voahangy; Apinjoh, Tobias; Ariani, Cristina; Ashley, Elizabeth A; Auburn, Sarah; Awandare, Gordon A; Ba, Hampate; Baraka, Vito; Barry, Alyssa E; Bejon, Philip; Bertin, Gwladys I; Boni, Maciej F; Borrmann, Steffen; Bousema, Teun; Branch, Oralee; Bull, Peter C; Busby, George BJ; Chookajorn, Thanat; Chotivanich, Kesinee; Claessens, Antoine; Conway, David; Craig, Alister; D'Alessandro, Umberto; Dama, Souleymane; Day, Nicholas Pj; Denis, Brigitte; Diakite, Mahamadou; Djimdé, Abdoulaye; Dolecek, Christiane; Dondorp, Arjen M; Drakeley, Chris; Drury, Eleanor; Duffy, Patrick; Echeverry, Diego F; Egwang, Thomas G; Erko, Berhanu; Fairhurst, Rick M; Faiz, Abdul; Fanello, Caterina A; Fukuda, Mark M; Gamboa, Dionicia; Ghansah, Anita; Golassa, Lemu; Goncalves, Sonia; Hamilton, William L; Harrison, GL Abby; Hart, Lee; Henrichs, Christa; Hien, Tran Tinh; Hill, Catherine A; Hodgson, Abraham; Hubbart, Christina; Imwong, Mallika; Ishengoma, Deus S; Jackson, Scott A; Jacob, Chris G; Jeffery, Ben; Jeffreys, Anna E; Johnson, Kimberly J; Jyothi, Dushyanth; Kamaliddin, Claire; Kamau, Edwin; Kekre, Mihir; Kluczynski, Krzysztof; Kochakarn, Theerarat; Konaté, Abibatou; Kwiatkowski, Dominic P; Kyaw, Myat Phone; Lim, Pharath; Lon, Chanthap; Loua, Kovana M; Maïga-Ascofaré, Oumou; Malangone, Cinzia; Manske, Magnus; Marfurt, Jutta; Marsh, Kevin; Mayxay, Mayfong; Miles, Alistair; Miotto, Olivo; Mobegi, Victor; Mokuolu, Olugbenga A; Montgomery, Jacqui; Mueller, Ivo; Newton, Paul N; Nguyen, Thuy; Nguyen, Thuy-Nhien; Noedl, Harald; Nosten, Francois; Noviyanti, Rintis; Nzila, Alexis; Ochola-Oyier, Lynette I; Ocholla, Harold; Oduro, Abraham; Omedo, Irene; Onyamboko, Marie A; Ouedraogo, Jean-Bosco; Oyebola, Kolapo; Pearson, Richard D; Peshu, Norbert; Phyo, Aung Pyae; Plowe, Chris V; Price, Ric N; Pukrittayakamee, Sasithon; Randrianarivelojosia, Milijaona; Rayner, Julian C; Ringwald, Pascal; Rockett, Kirk A; Rowlands, Katherine; Ruiz, Lastenia; Saunders, David; Shayo, Alex; Siba, Peter; Simpson, Victoria J; Stalker, Jim; Su, Xin-Zhuan; Sutherland, Colin; Takala-Harrison, Shannon; Tavul, Livingstone; Thathy, Vandana; Tshefu, Antoinette; Verra, Federica; Vinetz, Joseph; Wellems, Thomas E; Wendler, Jason; White, Nicholas J; Wright, Ian; Yavo, William; Ye, Htut

An open dataset of Plasmodium falciparum genome variation in 7,000 worldwide samples. (2021) MalariaGEN; Ahouidi, Ambroise; Ali, Mozam; Almagro-Garcia, Jacob; Amambua-Ngwa, Alfred; Amaratunga, Chanaki; Amato, Roberto; Amenga-Etego, Lucas; Andagalu, Ben; Anderson, Tim JC; Andrianaranjaka, Voahangy; Apinjoh, Tobias; Ariani, Cristina; Ashley, Elizabeth A; Auburn, Sarah; Awandare, Gordon A; Ba, Hampate; Baraka, Vito; Barry, Alyssa E; Bejon, Philip; Bertin, Gwladys I; Boni, Maciej F; Borrmann, Steffen; Bousema, Teun; Branch, Oralee; Bull, Peter C; Busby, George BJ; Chookajorn, Thanat; Chotivanich, Kesinee; Claessens, Antoine; Conway, David; Craig, Alister; D'Alessandro, Umberto; Dama, Souleymane; Day, Nicholas Pj; Denis, Brigitte; Diakite, Mahamadou; Djimdé, Abdoulaye; Dolecek, Christiane; Dondorp, Arjen M; Drakeley, Chris; Drury, Eleanor; Duffy, Patrick; Echeverry, Diego F; Egwang, Thomas G; Erko, Berhanu; Fairhurst, Rick M; Faiz, Abdul; Fanello, Caterina A; Fukuda, Mark M; Gamboa, Dionicia; Ghansah, Anita; Golassa, Lemu; Goncalves, Sonia; Hamilton, William L; Harrison, GL Abby; Hart, Lee; Henrichs, Christa; Hien, Tran Tinh; Hill, Catherine A; Hodgson, Abraham; Hubbart, Christina; Imwong, Mallika; Ishengoma, Deus S; Jackson, Scott A; Jacob, Chris G; Jeffery, Ben; Jeffreys, Anna E; Johnson, Kimberly J; Jyothi, Dushyanth; Kamaliddin, Claire; Kamau, Edwin; Kekre, Mihir; Kluczynski, Krzysztof; Kochakarn, Theerarat; Konaté, Abibatou; Kwiatkowski, Dominic P; Kyaw, Myat Phone; Lim, Pharath; Lon, Chanthap; Loua, Kovana M; Maïga-Ascofaré, Oumou; Malangone, Cinzia; Manske, Magnus; Marfurt, Jutta; Marsh, Kevin; Mayxay, Mayfong; Miles, Alistair; Miotto, Olivo; Mobegi, Victor; Mokuolu, Olugbenga A; Montgomery, Jacqui; Mueller, Ivo; Newton, Paul N; Nguyen, Thuy; Nguyen, Thuy-Nhien; Noedl, Harald; Nosten, Francois; Noviyanti, Rintis; Nzila, Alexis; Ochola-Oyier, Lynette I; Ocholla, Harold; Oduro, Abraham; Omedo, Irene; Onyamboko, Marie A; Ouedraogo, Jean-Bosco; Oyebola, Kolapo; Pearson, Richard D; Peshu, Norbert; Phyo, Aung Pyae; Plowe, Chris V; Price, Ric N; Pukrittayakamee, Sasithon; Randrianarivelojosia, Milijaona; Rayner, Julian C; Ringwald, Pascal; Rockett, Kirk A; Rowlands, Katherine; Ruiz, Lastenia; Saunders, David; Shayo, Alex; Siba, Peter; Simpson, Victoria J; Stalker, Jim; Su, Xin-Zhuan; Sutherland, Colin; Takala-Harrison, Shannon; Tavul, Livingstone; Thathy, Vandana; Tshefu, Antoinette; Verra, Federica; Vinetz, Joseph; Wellems, Thomas E; Wendler, Jason; White, Nicholas J; Wright, Ian; Yavo, William; Ye, Htut

Diagnostic accuracy of a liquid chromatography-tandem mass spectrometry assay in small hair samples for rifampin-resistant tuberculosis drug concentrations in a routine care setting. (2021) Metcalfe, John; Bacchetti, Peter; Esmail, Ali; Reckers, Andrew; Aguilar, David; Wen, Anita; Huo, Shu; Muyindike, Winnie R; Hahn, Judith A; Dheda, Keertan; Gandhi, Monica; Gerona, Roy

The antimalarial efficacy and mechanism of resistance of the novel chemotype DDD01034957. (2021) Miguel-Blanco, Celia; Murithi, James M; Benavente, Ernest Diez; Angrisano, Fiona; Sala, Katarzyna A; van Schalkwyk, Donelly A; Vanaerschot, Manu; Schwach, Frank; Fuchter, Matthew J; Billker, Oliver; Sutherland, Colin J; Campino, Susana G; Clark, Taane G; Blagborough, Andrew M; Fidock, David A; Herreros, Esperanza; Gamo, Francisco Javier; Baum, Jake; Delves, Michael J

Persistence of mRNA indicative of Plasmodium falciparum ring-stage parasites 42 days after artemisinin and non-artemisinin combination therapy in naturally infected Malians. (2021) Mahamar, Almahamoudou; Lanke, Kjerstin; Graumans, Wouter; Diawara, Halimatou; Sanogo, Koualy; Diarra, Kalifa; Niambele, Sidi Mohamed; Gosling, Roly; Drakeley, Chris; Chen, Ingrid; Dicko, Alassane; Bousema, Teun; Roh, Michelle E

Profiling of Haemophilus influenzae strain R2866 with carbohydrate-based covalent probes. (2021) Metier, Camille; Dow, Jennifer; Wootton, Hayley; Lynham, Steven; Wren, Brendan; Wagner, Gerd K

Use of Precision-Cut Tissue Slices as a Translational Model to Study Host-Pathogen Interaction. (2021) Majorova, Dominika; Atkins, Elizabeth; Martineau, Henny; Vokral, Ivan; Oosterhuis, Dorenda; Olinga, Peter; Wren, Brendan; Cuccui, Jon; Werling, Dirk

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MdaB and NfrA, Two Novel Reductases Important in the Survival and Persistence of the Major Enteropathogen Campylobacter jejuni. (2021) Nasher, Fauzy; Taylor, Aidan J; Elmi, Abdi; Lehri, Burhan; Ijaz, Umer Z; Baker, Dave; Goram, Richard; Lynham, Steven; Singh, Dipali; Stabler, Richard; Kelly, David J; Gundogdu, Ozan; Wren, Brendan W

Identification of Single-Nucleotide Polymorphisms in the Mitochondrial Genome and Kelch 13 Gene of Plasmodium falciparum in Different Geographical Populations. (2021) Nydahl, Tine Kliim; Ahorhorlu, Samuel Yao; Ndiaye, Magatte; Das, Manoj Kumar; Hansson, Helle; Bravo, Marina Crespo; Wang, Christian William; Lusingu, John; Theisen, Michael; Singh, Susheel Kumar; Singh, Subhash; Campino, Susana; Lund, Ole; Roper, Cally; Alifrangis, Michael

Failure of rapid diagnostic tests in Plasmodium falciparum malaria cases among travelers to the UK and Ireland: Identification and characterisation of the parasites. (2021) Nolder, Debbie; Stewart, Lindsay; Tucker, Julie; Ibrahim, Amy; Gray, Adam; Corrah, Tumena; Gallagher, Carmel; John, Laurence; O'Brien, Edel; Aggarwal, Dinesh; Benavente, Ernest Diez; van Schalkwyk, Donelly; Henriques, Gisela; Sepúlveda, Nuno; Campino, Susana; Chiodini, Peter; Sutherland, Colin; Beshir, Khalid B

Clusters of Drug-Resistant Mycobacterium tuberculosis Detected by Whole-Genome Sequence Analysis of Nationwide Sample, Thailand, 2014-2017. (2021) Nonghanphithak, Ditthawat; Chaiprasert, Angkana; Smithtikarn, Saijai; Kamolwat, Phalin; Pungrassami, Petchawan; Chongsuvivatwong, Virasakdi; Mahasirimongkol, Surakameth; Reechaipichitkul, Wipa; Leepiyasakulchai, Chaniya; Phelan, Jody E; Blair, David; Clark, Taane G; Faksri, Kiatichai

Plasmodium falciparum Guanylyl Cyclase-Alpha and the Activity of Its Appended P4-ATPase Domain Are Essential for cGMP Synthesis and Blood-Stage Egress. (2021) Nofal, Stephanie D; Patel, Avnish; Blackman, Michael J; Flueck, Christian; Baker, David A

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Understanding the interaction between cytomegalovirus and tuberculosis in children: The way forward. (2021) Olbrich, Laura; Stockdale, Lisa; Basu Roy, Robindra; Song, Rinn; Cicin-Sain, Luka; Whittaker, Elizabeth; Prendergast, Andrew J; Fletcher, Helen; Seddon, James A

Electrochemical Detection of Single-Nucleotide Polymorphism Associated with Rifampicin Resistance in Mycobacterium tuberculosis Using Solid-Phase Primer Elongation with Ferrocene-Linked Redox-Labeled Nucleotides. (2021) Ortiz, Mayreli; Jauset-Rubio, Miriam; Skouridou, Vasso; Machado, Diana; Viveiros, Miguel; Clark, Taane G; Simonova, Anna; Kodr, David; Hocek, Michal; O'Sullivan, Ciara K

Predicted norovirus resurgence in 2021-2022 due to the relaxation of nonpharmaceutical interventions associated with COVID-19 restrictions in England: a mathematical modeling study. (2021) O'Reilly, Kathleen M; Sandman, Frank; Allen, David; Jarvis, Christopher I; Gimma, Amy; Douglas, Amy; Larkin, Lesley; Wong, Kerry LM; Baguelin, Marc; Baric, Ralph S; Lindesmith, Lisa C; Goldstein, Richard A; Breuer, Judith; Edmunds, W John

Characterizing the genomic variation and population dynamics of Plasmodium falciparum malaria parasites in and around Lake Victoria, Kenya. (2021) Osborne, Ashley; Manko, Emilia; Takeda, Mika; Kaneko, Akira; Kagaya, Wataru; Chan, Chim; Ngara, Mtakai; Kongere, James; Kita, Kiyoshi; Campino, Susana; Kaneko, Osamu; Gitaka, Jesse; Clark, Taane G

Prevalence of ESBL-producing Escherichia coli in adults with and without HIV presenting with urinary tract infections to primary care clinics in Zimbabwe. (2021) Olaru, Ioana D; Ferrand, Rashida A; Chisenga, Mutsawashe; Yeung, Shunmay; Macrae, Bruce; Chonzi, Prosper; Stabler, Richard A; Hopkins, Heidi; Mabey, David; Masunda, Kudzai PE; Kranzer, Katharina

Pretomanid with bedaquiline and linezolid for drug-resistant TB: a comparison of prospective cohorts. (2021) Oelofse, S; Esmail, A; Diacon, AH; Conradie, F; Olayanju, O; Ngubane, N; Howell, P; Everitt, D; Crook, AM; Mendel, CM; Wills, GH; Olugbosi, M; Del Parigi, A; Sun, E; Calatroni, A; Spigelman, M; Dheda, K

An inter-laboratory study to investigate the impact of the bioinformatics component on microbiome analysis using mock communities. (2021) O'Sullivan, Denise M; Doyle, Ronan M; Temisak, Sasithon; Redshaw, Nicholas; Whale, Alexandra S; Logan, Grace; Huang, Jiabin; Fischer, Nicole; Amos, Gregory CA; Preston, Mark D; Marchesi, Julian R; Wagner, Josef; Parkhill, Julian; Motro, Yair; Denise, Hubert; Finn, Robert D; Harris, Kathryn A; Kay, Gemma L; O'Grady, Justin; Ransom-Jones, Emma; Wu, Huihai; Laing, Emma; Studholme, David J; Benavente, Ernest Diez; Phelan, Jody; Clark, Taane G; Moran-Gilad, Jacob; Huggett, Jim F

T cell assays differentiate clinical and subclinical SARS-CoV-2 infections from cross-reactive antiviral responses. (2021) Ogbe, Ane; Kronsteiner, Barbara; Skelly, Donal T; Pace, Matthew; Brown, Anthony; Adland, Emily; Adair, Kareena; Akhter, Hossain Delowar; Ali, Mohammad; Ali, Serat-E; Angyal, Adrienn; Ansari, M Azim; Arancibia-Cárcamo, Carolina V; Brown, Helen; Chinnakannan, Senthil; Conlon, Christopher; de Lara, Catherine; de Silva, Thushan; Dold, Christina; Dong, Tao; Donnison, Timothy; Eyre, David; Flaxman, Amy; Fletcher, Helen; Gardner, Joshua; Grist, James T; Hackstein, Carl-Philipp; Jaruthamsophon, Kanoot; Jeffery, Katie; Lambe, Teresa; Lee, Lian; Li, Wenqin; Lim, Nicholas; Matthews, Philippa C; Mentzer, Alexander J; Moore, Shona C; Naisbitt, Dean J; Ogese, Monday; Ogg, Graham; Openshaw, Peter; Pirmohamed, Munir; Pollard, Andrew J; Ramamurthy, Narayan; Rongkard, Patpong; Rowland-Jones, Sarah; Sampson, Oliver; Screaton, Gavin; Sette, Alessandro; Stafford, Lizzie; Thompson, Craig; Thomson, Paul J; Thwaites, Ryan; Vieira, Vinicius; Weiskopf, Daniela; Zacharopoulou, Panagiota; Oxford Immunology Network Covid-19 Response T Cell Consortium; Oxford Protective T Cell Immunology for COVID-19 (OPTIC) Clinica; Turtle, Lance; Klenerman, Paul; Goulder, Philip; Frater, John; Barnes, Eleanor; Dunachie, Susanna

The association between antimicrobial resistance and HIV infection: a systematic review and meta-analysis. (2021) Olaru, Ioana D; Tacconelli, Evelina; Yeung, Shunmay; Ferrand, Rashida A; Stabler, Richard A; Hopkins, Heidi; Aiken, Alexander M; Kranzer, Katharina

Geographical and temporal variation in reduction of malaria infection among children under 5 years of age throughout Nigeria. (2021) Oyibo, Wellington; Ntadom, Godwin; Uhomoibhi, Perpetua; Oresanya, Olusola; Ogbulafor, Nnenna; Ajumobi, Olufemi; Okoh, Festus; Maxwell, Kolawole; Ezeiru, Sonachi; Nwokolo, Ernest; Amajoh, Chioma; Ezeigwe, Nnenna; Audu, Mohammed; Conway, David

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Synchrony between daily rhythms of malaria parasites and hosts is driven by an essential amino acid. (2021) Prior, Kimberley F; Middleton, Benita; Owolabi, Alíz TY; Westwood, Mary L; Holland, Jacob; O'Donnell, Aidan J; Blackman, Michael J; Skene, Debra J; Reece, Sarah E

Impact of a personalised, digital, HIV self-testing app-based program on linkages and new infections in the township populations of South Africa. (2021) Pai, Nitika; Esmail, Aliasgar; Saha Chaudhuri, Paramita; Oelofse, Suzette; Pretorius, Marietjie; Marathe, Gayatri; Daher, Jana; Smallwood, Megan; Karatzas, Nicolaos; Fadul, Mohammed; de Waal, Anna; Engel, Nora; Zwerling, Alice Anne; Dheda, Keertan

A Bayesian approach for estimating typhoid fever incidence from large-scale facility-based passive surveillance data. (2021) Phillips, Maile T; Meiring, James E; Voysey, Merryn; Warren, Joshua L; Baker, Stephen; Basnyat, Buddha; Clemens, John D; Dolecek, Christiane; Dunstan, Sarah J; Dougan, Gordon; Gordon, Melita A; Thindwa, Deus; Heyderman, Robert S; Holt, Kathryn E; Qadri, Firdausi; Pollard, Andrew J; Pitzer, Virginia E; STRATAA Study Group

BCG Specific and Nonspecific Effects: Different Questions, Similar Challenges. (2021) Prentice, Sarah; Dockrell, Hazel M

BCG-induced non-specific effects on heterologous infectious disease in Ugandan neonates: an investigator-blind randomised controlled trial. (2021) Prentice, Sarah; Nassanga, Beatrice; Webb, Emily L; Akello, Florence; Kiwudhu, Fred; Akurut, Hellen; Elliott, Alison M; Arts, Rob JW; Netea, Mihai G; Dockrell, Hazel M; Cose, Stephen; Delayed BCG Study Team

Accelerating the preclinical development of effective vaccines for protection against Mycobacterium tuberculosis. (2021) Painter, HE

Multiple unbiased approaches identify oxidosqualene cyclase as the molecular target of a promising anti-leishmanial. (2021) Paradela, Luciana S; Wall, Richard J; Carvalho, Sandra; Chemi, Giulia; Corpas-Lopez, Victoriano; Moynihan, Eoin; Bello, Davide; Patterson, Stephen; Güther, Maria Lucia S; Fairlamb, Alan H; Ferguson, Michael AJ; Zuccotto, Fabio; Martin, Julio; Gilbert, Ian H; Wyllie, Susan

Malaria Parasite Schizont Egress Antigen-1 Plays an Essential Role in Nuclear Segregation during Schizogony. (2021) Perrin, Abigail J; Bisson, Claudine; Faull, Peter A; Renshaw, Matthew J; Lees, Rebecca A; Fleck, Roland A; Saibil, Helen R; Snijders, Ambrosius P; Baker, David A; Blackman, Michael J

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Lipid transport proteins in malaria, from Plasmodium parasites to their hosts. (2021) Ressurreição, Margarida; van Ooij, Christiaan

Genetic diversity of Salmonella Paratyphi A isolated from enteric fever patients in Bangladesh from 2008 to 2018. (2021) Rahman, Sadia Isfat Ara; Nguyen, To Nguyen Thi; Khanam, Farhana; Thomson, Nicholas R; Dyson, Zoe A; Taylor-Brown, Alyce; Chowdhury, Emran Kabir; Dougan, Gordon; Baker, Stephen; Qadri, Firdausi

Genome-wide analysis provides a deeper understanding of the population structure of the Salmonella enterica serotype Paratyphi B complex in Bangladesh. (2021) Rahman, Sadia Isfat Ara; Taylor-Brown, Alyce; Khanam, Farhana; Khan, Ashraful Islam; Horesh, Gal; Dyson, Zoe A; Begum, Yasmin Ara; Chowdhury, Emran Kabir; Qadri, Firdausi; Dougan, Gordon; Thomson, Nicholas R

Synthesis, antiproliferative and antitrypanosomal activities, and DNA binding of novel 6-amidino-2-arylbenzothiazoles. (2021) Racané, Livio; Rep, Valentina; Kraljević Pavelić, Sandra; Grbčić, Petra; Zonjić, Iva; Radić Stojković, Marijana; Taylor, Martin C; Kelly, John M; Raić-Malić, Silvana

Bioinformatic Analysis of the Campylobacter jejuni Type VI Secretion System and Effector Prediction. (2021) Robinson, Luca; Liaw, Janie; Omole, Zahra; Xia, Dong; van Vliet, Arnoud HM; Corcionivoschi, Nicolae; Hachani, Abderrahman; Gundogdu, Ozan

Gastrointestinal carriage of Klebsiella pneumoniae in a general adult population: a cross-sectional study of risk factors and bacterial genomic diversity. (2021) Raffelsberger, Niclas; Hetland, Marit Andrea Klokkhammer; Svendsen, Kristian; Småbrekke, Lars; Löhr, Iren Høyland; Andreassen, Lotte Leonore Eivindsdatter; Brisse, Sylvain; Holt, Kathryn E; Sundsfjord, Arnfinn; Samuelsen, Ørjan; Gravningen, Kirsten

Getting to zero: micro-foci of malaria in the Solomon Islands requires stratified control. (2021) Russell, Tanya L; Grignard, Lynn; Apairamo, Alan; Kama, Nathan; Bobogare, Albino; Drakeley, Chris; Burkot, Thomas R

Protective Effect of Nasal Colonisation with ∆cps/piaA and ∆cps/proABCStreptococcus pneumoniae Strains against Recolonisation and Invasive Infection. (2021) Ramos-Sevillano, Elisa; Ercoli, Giuseppe; Guerra-Assunção, José Afonso; Felgner, Philip; Ramiro de Assis, Rafael; Nakajima, Rie; Goldblatt, David; Tetteh, Kevin Kweku Adjei; Heyderman, Robert Simon; Gordon, Stephen Brian; Ferreria, Daniela Mulari; Brown, Jeremy Stuart

Framework for Characterizing Longitudinal Antibody Response in Children After Plasmodium falciparum Infection. (2021) Rogier, Eric; Nace, Doug; Dimbu, Pedro R; Wakeman, Brian; Pohl, Jan; Beeson, James G; Drakeley, Chris; Tetteh, Kevin; Plucinski, Mateusz

Management of Acinetobacter baumannii infection in intensive care units. (2021) Raine, R; Dheda, K

Enhanced Health Facility Surveys to Support Malaria Control and Elimination across Different Transmission Settings in the Philippines. (2021) Reyes, Ralph A; Fornace, Kimberly M; Macalinao, Maria Lourdes M; Boncayao, Beaulah L; De La Fuente, Ellaine S; Sabanal, Hennessey M; Bareng, Alison Paolo N; Medado, Inez Andrea P; Mercado, Edelwisa S; Baquilod, Mario S; Luchavez, Jennifer S; Hafalla, Julius Clemence R; Drakeley, Chris J; Espino, Fe Esperanza J

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Novel computational models offer alternatives to animal testing for assessing eye irritation and corrosion potential of chemicals. (2021) Silva, Arthur C; Borba, Joyce VVB; Alves, Vinicius M; Hall, Steven US; Furnham, Nicholas; Kleinstreuer, Nicole; Muratov, Eugene; Tropsha, Alexander; Andrade, Carolina Horta

Case Report: severe paediatric COVID-19 pneumonitis treated with remdesivir and nitazoxanide. (2021) Sanchez Clemente, Nuria; Pang, Juanita; Rodrigues, Charlene; Aurora, Paul; Breuer, Judith

SARS-CoV-2 variants of concern dominate in Lahore, Pakistan in April 2021. (2021) Sarwar, Muhammad Bilal; Yasir, Muhammad; Alikhan, Nabil-Fareed; Afzal, Nadeem; de Oliveira Martins, Leonardo; Le Viet, Thanh; Trotter, Alexander J; Prosolek, Sophie J; Kay, Gemma L; Foster-Nyarko, Ebenezer; Rudder, Steven; Baker, David J; Muntaha, Sidra Tul; Roman, Muhammad; Webber, Mark A; Shafiq, Almina; Shabbir, Bilquis; Akram, Javed; Page, Andrew J; Jahan, Shah

Pyronaridine-artesunate or dihydroartemisinin-piperaquine combined with single low-dose primaquine to prevent Plasmodium falciparum malaria transmission in Ouélessébougou, Mali: a four-arm, single-blind, phase 2/3, randomised trial. (2021) Stone, William; Mahamar, Almahamoudou; Sanogo, Koualy; Sinaba, Youssouf; Niambele, Sidi M; Sacko, Adama; Keita, Sekouba; Youssouf, Ahamadou; Diallo, Makonon; Soumare, Harouna M; Kaur, Harparkash; Lanke, Kjerstin; Ter Heine, Rob; Bradley, John; Issiaka, Djibrilla; Diawara, Halimatou; Traore, Sekou F; Bousema, Teun; Drakeley, Chris; Dicko, Alassane

Characterization of the Infant Immune System and the Influence and Immunogenicity of BCG Vaccination in Infant and Adult Rhesus Macaques. (2021) Sarfas, Charlotte; White, Andrew D; Sibley, Laura; Morrison, Alexandra L; Gullick, Jennie; Lawrence, Steve; Dennis, Mike J; Marsh, Philip D; Fletcher, Helen A; Sharpe, Sally A

Determinants of brain swelling in pediatric and adult cerebral malaria. (2021) Sahu, Praveen K; Duffy, Fergal J; Dankwa, Selasi; Vishnyakova, Maria; Majhi, Megharay; Pirpamer, Lukas; Vigdorovich, Vladimir; Bage, Jabamani; Maharana, Sameer; Mandala, Wilson; Rogerson, Stephen J; Seydel, Karl B; Taylor, Terrie E; Kim, Kami; Sather, D Noah; Mohanty, Akshaya; Mohanty, Rashmi R; Mohanty, Anita; Pattnaik, Rajyabardhan; Aitchison, John D; Hoffmann, Angelika; Mohanty, Sanjib; Smith, Joseph D; Bernabeu, Maria; Wassmer, Samuel C

Diagnostic Accuracy of the Cepheid 3-gene Host Response Fingerstick Blood Test in a Prospective, Multi-site Study: Interim Results. (2021) Sutherland, Jayne S; van der Spuy, Gian; Gindeh, Awa; Thuong, Nguyen Thuy Thuong; Namuganga, AnnRitah; Owolabi, Olumuyiwa; Mayanja-Kizza, Harriet; Nsereko, Mary; Thwaites, Guy; Winter, Jill; Dockrell, Hazel M; Scriba, Thomas J; Geluk, Annemieke; Corstjens, Paul; Stanley, Kim; Richardson, Tracy; Shaw, Jane A; Smith, Bronwyn; Malherbe, Stephanus T; Walzl, Gerhard; TrENDx-TB Consortium

RNA Origami: Packaging a Segmented Genome in Orbivirus Assembly and Replication. (2021) Sung, Po-Yu; Roy, Polly

A genetic intervention. (2021) Sutherland, Colin; Menard, Didier

Analysis of the Interaction between Pentraxins and Leishmania Phosphoglycans. (2021) Seow, ES

Phylogeography and resistome of pneumococcal meningitis in West Africa before and after vaccine introduction. (2021) Senghore, Madikay; Tientcheu, Peggy-Estelle; Worwui, Archibald Kwame; Jarju, Sheikh; Okoi, Catherine; Suso, Sambou MS; Foster-Nyarko, Ebenezer; Ebruke, Chinelo; Sonko, Mohamadou; Kourna, Mamdou Hama; Agossou, Joseph; Tsolenyanu, Enyonam; Renner, Lorna Awo; Ansong, Daniel; Sanneh, Bakary; Cisse, Catherine Boni; Boula, Angeline; Miwanda, Berthe; Lo, Stephanie W; Gladstone, Rebecca A; Schwartz, Stephanie; Hawkins, Paulina; McGee, Lesley; Klugman, Keith P; Breiman, Robert F; Bentley, Stephen D; Mwenda, Jason M; Kwambana-Adams, Brenda Anna; Antonio, Martin

SARS-CoV-2 variants of concern dominate in Lahore, Pakistan in April 2021. (2021) Sarwar, Muhammad Bilal; Yasir, Muhammad; Alikhan, Nabil-Fareed; Afzal, Nadeem; de Oliveira Martins, Leonardo; Viet, Thanh Le; Trotter, Alexander J; Prosolek, Sophie J; Kay, Gemma L; Foster-Nyarko, Ebenezer; Rudder, Steven; Baker, David J; Sidra-tul-muntaha; Roman, Muhammad; Webber, Mark A; Shafiq, Almina; Shabir, Balqees; Akram, Javed; Page, Andrew J; Jahan, Shah

Rapid feedback on hospital onset SARS-CoV-2 infections combining epidemiological and sequencing data. (2021) Stirrup, Oliver; Hughes, Joseph; Parker, Matthew; Partridge, David G; Shepherd, James G; Blackstone, James; Coll, Francesc; Keeley, Alexander; Lindsey, Benjamin B; Marek, Aleksandra; Peters, Christine; Singer, Joshua B; COVID-19 Genomics UK (COG-UK) consortium; Tamuri, Asif; de Silva, Thushan I; Thomson, Emma C; Breuer, Judith

Image-Based In Vitro Screening Reveals the Trypanostatic Activity of Hydroxymethylnitrofurazone against Trypanosoma cruzi. (2021) Scarim, Cauê Benito; Olmo, Francisco; Ferreira, Elizabeth Igne; Chin, Chung Man; Kelly, John M; Fortes Francisco, Amanda

Flavivirus integrations in Aedes aegypti are limited and highly conserved across samples from different geographic regions unlike integrations in Aedes albopictus. (2021) Spadar, Anton; Phelan, Jody E; Benavente, Ernest Diez; Campos, Monica; Gomez, Lara Ferrero; Mohareb, Fady; Clark, Taane G; Campino, Susana

Congenital Chagas disease in Santa Cruz Department, Bolivia, is dominated by Trypanosoma cruzi lineage V. (2021) Sanchez, Leny; Messenger, Louisa A; Bhattacharyya, Tapan; Gilman, Robert H; Mayta, Holger; Colanzi, Rony; Bozo, Ricardo; Verástegui, Manuela; Miles, Michael A; Bern, Caryn

Development of an automated platform for the optimal production of glycoconjugate vaccines expressed in Escherichia coli. (2021) Samaras, Jasmin J; Mauri, Marta; Kay, Emily J; Wren, Brendan W; Micheletti, Martina

Efficacy of NVX-CoV2373 Covid-19 Vaccine against the B.1.351 Variant. (2021) Shinde, Vivek; Bhikha, Sutika; Hoosain, Zaheer; Archary, Moherndran; Bhorat, Qasim; Fairlie, Lee; Lalloo, Umesh; Masilela, Mduduzi SL; Moodley, Dhayendre; Hanley, Sherika; Fouche, Leon; Louw, Cheryl; Tameris, Michele; Singh, Nishanta; Goga, Ameena; Dheda, Keertan; Grobbelaar, Coert; Kruger, Gertruida; Carrim-Ganey, Nazira; Baillie, Vicky; de Oliveira, Tulio; Lombard Koen, Anthonet; Lombaard, Johan J; Mngqibisa, Rosie; Bhorat, As'ad E; Benadé, Gabriella; Lalloo, Natasha; Pitsi, Annah; Vollgraaff, Pieter-Louis; Luabeya, Angelique; Esmail, Aliasgar; Petrick, Friedrich G; Oommen-Jose, Aylin; Foulkes, Sharne; Ahmed, Khatija; Thombrayil, Asha; Fries, Lou; Cloney-Clark, Shane; Zhu, Mingzhu; Bennett, Chijioke; Albert, Gary; Faust, Emmanuel; Plested, Joyce S; Robertson, Andreana; Neal, Susan; Cho, Iksung; Glenn, Greg M; Dubovsky, Filip; Madhi, Shabir A; 2019nCoV-501 Study Group

Entry-competent-replication-abortive African horse sickness virus strains elicit robust immunity in ponies against all serotypes. (2021) Sullivan, Edward; Lecollinet, Sylvie; Kerviel, Adeline; Hue, Erika; Pronost, Stéphane; Beck, Cécile; Dumarest, Marine; Zientara, Stephan; Roy, Polly

Artemisinin susceptibility in the malaria parasite Plasmodium falciparum: propellers, adaptor proteins and the need for cellular healing. (2021) Sutherland, Colin J; Henrici, Ryan C; Artavanis-Tsakonas, Katerina

Maintaining Plasmodium falciparum gametocyte infectivity during blood collection and transport for mosquito feeding assays in the field. (2021) Soumare, Harouna M; Guelbeogo, Wamdaogo Moussa; van de Vegte-Bolmer, Marga; van Gemert, Geert-Jan; Soumanaba, Zongo; Ouedraogo, Alphonse; Ouattara, Maurice S; Abdullahi, Ahmad; Jadama, Lamin; Camara, Muhammed M; Gaye, Pa Modou; Mendy, Michael; Davis, Nwakanma; Tiono, Alfred B; D'Alessandro, Umberto; Drakeley, Chris; Bousema, Teun; Moreno, Marta; Collins, Katharine A

Drug reformulation for a neglected disease. The NANOHAT project to develop a safer more effective sleeping sickness drug. (2021) Sanderson, Lisa; da Silva, Marcelo; Sekhar, Gayathri N; Brown, Rachel C; Burrell-Saward, Hollie; Fidanboylu, Mehmet; Liu, Bo; Dailey, Lea Ann; Dreiss, Cécile A; Lorenz, Chris; Christie, Mark; Persaud, Shanta J; Yardley, Vanessa; Croft, Simon L; Valero, Margarita; Thomas, Sarah A

Disruption of Cxcr3 chemotactic signaling alters lysosomal function and renders macrophages more microbicidal. (2021) Sommer, Frida; Torraca, Vincenzo; Xie, Yufei; In 't Veld, Aliede E; Willemse, Joost; Meijer, Annemarie H

G6PD Polymorphisms and Hemolysis After Antimalarial Treatment With Low Single-Dose Primaquine: A Pooled Analysis of Six African Clinical Trials. (2021) Sepúlveda, Nuno; Grignard, Lynn; Curry, Jonathan; Mahey, Laleta; Bastiaens, Guido JH; Tiono, Alfred B; Okebe, Joseph; Coulibaly, Sam A; Gonçalves, Bronner P; Affara, Muna; Ouédraogo, Alphonse; Bougouma, Edith C; Sanou, Guillaume S; Nébié, Issa; Lanke, Kjerstin; Sirima, Sodiomon B; Dicko, Alassane; d'Alessandro, Umberto; Clark, Taane G; Campino, Susana; Chen, Ingrid; Eziefula, Alice C; Gosling, Roly; Bousema, Teun; Drakeley, Chris

Methylation analysis of Klebsiella pneumoniae from Portuguese hospitals. (2021) Spadar, Anton; Perdigão, João; Phelan, Jody; Charleston, James; Modesto, Ana; Elias, Rita; de Sessions, Paola Florez; Hibberd, Martin L; Campino, Susana; Duarte, Aida; Clark, Taane G

Assessment of dengue and COVID-19 antibody rapid diagnostic tests cross-reactivity in Indonesia. (2021) Santoso, Marsha S; Masyeni, Sri; Haryanto, Sotianingsih; Yohan, Benediktus; Hibberd, Martin L; Sasmono, R Tedjo

Cervicovaginal Immune Activation in Zambian Women With Female Genital Schistosomiasis. (2021) Sturt, Amy S; Webb, Emily L; Patterson, Catriona; Phiri, Comfort R; Mweene, Tobias; Kjetland, Eyrun F; Mudenda, Maina; Mapani, Joyce; Mutengo, Mable M; Chipeta, James; van Dam, Govert J; Corstjens, Paul LAM; Ayles, Helen; Hayes, Richard J; Hansingo, Isaiah; Cools, Piet; van Lieshout, Lisette; Helmby, Helena; McComsey, Grace A; Francis, Suzanna C; Bustinduy, Amaya L

A snapshot of translation in Mycobacterium tuberculosis during exponential growth and nutrient starvation revealed by ribosome profiling. (2021) Sawyer, Elizabeth B; Phelan, Jody E; Clark, Taane G; Cortes, Teresa

T-Bet Controls Cellularity of Intestinal Group 3 Innate Lymphoid Cells. (2021) Schroeder, Jan-Hendrik; Meissl, Katrin; Hromadová, Dominika; Lo, Jonathan W; Neves, Joana F; Howard, Jane K; Helmby, Helena; Powell, Nick; Strobl, Birgit; Lord, Graham M

Impact of a Rapid Decline in Malaria Transmission on Antimalarial IgG Subclasses and Avidity. (2021) Ssewanyana, Isaac; Rek, John; Rodriguez, Isabel; Wu, Lindsey; Arinaitwe, Emmanuel; Nankabirwa, Joaniter I; Beeson, James G; Mayanja-Kizza, Harriet; Rosenthal, Philip J; Dorsey, Grant; Kamya, Moses R; Drakeley, Chris; Greenhouse, Bryan; Tetteh, Kevin KA

T

Bronchial Thermoplasty Global Registry (BTGR): 2-year results. (2021) Torrego, Alfons; Herth, Felix J; Munoz-Fernandez, Ana M; Puente, Luis; Facciolongo, Nicola; Bicknell, Stephen; Novali, Mauro; Gasparini, Stefano; Bonifazi, Martina; Dheda, Keertan; Andreo, Felipe; Votruba, Praha; Langton, David; Flandes, Javier; Fielding, David; Bonta, Peter I; Skowasch, Dirk; Schulz, Christian; Darwiche, Kaid; McMullen, Edmund; Grubb, G Mark; Niven, Robert

A heat-shock response regulated by the PfAP2-HS transcription factor protects human malaria parasites from febrile temperatures. (2021) Tintó-Font, Elisabet; Michel-Todó, Lucas; Russell, Timothy J; Casas-Vila, Núria; Conway, David J; Bozdech, Zbynek; Llinás, Manuel; Cortés, Alfred

Structural and Genomic Insights Into Pyrazinamide Resistance in Mycobacterium tuberculosis Underlie Differences Between Ancient and Modern Lineages. (2021) Tunstall, Tanushree; Phelan, Jody; Eccleston, Charlotte; Clark, Taane G; Furnham, Nicholas

Chest X-ray Analysis With Deep Learning-Based Software as a Triage Test for Pulmonary Tuberculosis: An Individual Patient Data Meta-Analysis of Diagnostic Accuracy. (2021) Tavaziva, Gamuchirai; Harris, Miriam; Abidi, Syed K; Geric, Coralie; Breuninger, Marianne; Dheda, Keertan; Esmail, Aliasgar; Muyoyeta, Monde; Reither, Klaus; Majidulla, Arman; Khan, Aamir J; Campbell, Jonathon R; David, Pierre-Marie; Denkinger, Claudia; Miller, Cecily; Nathavitharana, Ruvandhi; Pai, Madhukar; Benedetti, Andrea; Ahmad Khan, Faiz

Autocatalytic activation of a malarial egress protease is druggable and requires a protein cofactor. (2021) Tan, Michele SY; Koussis, Konstantinos; Withers-Martinez, Chrislaine; Howell, Steven A; Thomas, James A; Hackett, Fiona; Knuepfer, Ellen; Shen, Min; Hall, Matthew D; Snijders, Ambrosius P; Blackman, Michael J

Marine alkaloids as bioactive agents against protozoal neglected tropical diseases and malaria. (2021) Tempone, Andre G; Pieper, Pauline; Borborema, Samanta ET; Thevenard, Fernanda; Lago, Joao Henrique G; Croft, Simon L; Anderson, Edward A

The in vitro direct mycobacterial growth inhibition assay (MGIA) for the early evaluation of TB vaccine candidates and assessment of protective immunity: a protocol for non-human primate cells. (2021) Tanner, Rachel; Hoogkamer, Emily; Bitencourt, Julia; White, Andrew; Boot, Charelle; Sombroek, Claudia C; Harris, Stephanie A; O'Shea, Matthew K; Wright, Daniel; Wittenberg, Rachel; Sarfas, Charlotte; Satti, Iman; Verreck, Frank AW; Sharpe, Sally A; Fletcher, Helen A; McShane, Helen

Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Setting-specific Transmission Rates: A Systematic Review and Meta-analysis. (2021) Thompson, Hayley A; Mousa, Andria; Dighe, Amy; Fu, Han; Arnedo-Pena, Alberto; Barrett, Peter; Bellido-Blasco, Juan; Bi, Qifang; Caputi, Antonio; Chaw, Liling; De Maria, Luigi; Hoffmann, Matthias; Mahapure, Kiran; Ng, Kangqi; Raghuram, Jagadesan; Singh, Gurpreet; Soman, Biju; Soriano, Vicente; Valent, Francesca; Vimercati, Luigi; Wee, Liang En; Wong, Justin; Ghani, Azra C; Ferguson, Neil M

Malaria parasite egress at a glance. (2021) Tan, Michele SY; Blackman, Michael J

Repeat-Driven Generation of Antigenic Diversity in a Major Human Pathogen, Trypanosoma cruzi. (2021) Talavera-López, Carlos; Messenger, Louisa A; Lewis, Michael D; Yeo, Matthew; Reis-Cunha, João Luís; Matos, Gabriel Machado; Bartholomeu, Daniella C; Calzada, José E; Saldaña, Azael; Ramírez, Juan David; Guhl, Felipe; Ocaña-Mayorga, Sofía; Costales, Jaime A; Gorchakov, Rodion; Jones, Kathryn; Nolan, Melissa S; Teixeira, Santuza MR; Carrasco, Hernán José; Bottazzi, Maria Elena; Hotez, Peter J; Murray, Kristy O; Grijalva, Mario J; Burleigh, Barbara; Grisard, Edmundo C; Miles, Michael A; Andersson, Björn

Anopheles stephensi Mosquitoes as Vectors of Plasmodium vivax and falciparum, Horn of Africa, 2019. (2021) Tadesse, Fitsum G; Ashine, Temesgen; Teka, Hiwot; Esayas, Endashaw; Messenger, Louisa A; Chali, Wakweya; Meerstein-Kessel, Lisette; Walker, Thomas; Wolde Behaksra, Sinknesh; Lanke, Kjerstin; Heutink, Roel; Jeffries, Claire L; Mekonnen, Daniel Abebe; Hailemeskel, Elifaged; Tebeje, Surafel K; Tafesse, Temesgen; Gashaw, Abrham; Tsegaye, Tizita; Emiru, Tadele; Simon, Kigozi; Bogale, Eyuel Asemahegn; Yohannes, Gedeon; Kedir, Soriya; Shumie, Girma; Sabir, Senya Asfer; Mumba, Peter; Dengela, Dereje; Kolaczinski, Jan H; Wilson, Anne; Churcher, Thomas S; Chibsa, Sheleme; Murphy, Matthew; Balkew, Meshesha; Irish, Seth; Drakeley, Chris; Gadisa, Endalamaw; Bousema, Teun

A non-human primate in vitro functional assay for the early evaluation of TB vaccine candidates. (2021) Tanner, Rachel; White, Andrew D; Boot, Charelle; Sombroek, Claudia C; O'Shea, Matthew K; Wright, Daniel; Hoogkamer, Emily; Bitencourt, Julia; Harris, Stephanie A; Sarfas, Charlotte; Wittenberg, Rachel; Satti, Iman; Fletcher, Helen A; Verreck, Frank AW; Sharpe, Sally A; McShane, Helen

V

Context-aware genomic surveillance reveals hidden transmission of a carbapenemase-producing Klebsiella pneumoniae. (2021) Viehweger, Adrian; Blumenscheit, Christian; Lippmann, Norman; Wyres, Kelly L; Brandt, Christian; Hans, Jörg B; Hölzer, Martin; Irber, Luiz; Gatermann, Sören; Lübbert, Christoph; Pletz, Mathias W; Holt, Kathryn E; König, Brigitte

Evaluation of a Campylobacter jejuni N-glycan-ExoA glycoconjugate vaccine to reduce C. jejuni colonisation in chickens. (2021) Vohra, Prerna; Chintoan-Uta, Cosmin; Bremner, Abi; Mauri, Marta; Terra, Vanessa S; Cuccui, Jon; Wren, Brendan W; Vervelde, Lonneke; Stevens, Mark P; Glycoengineering of Veterinary Vaccines Consortium

Model-based assessment of the safety of community interventions with primaquine in sub-Saharan Africa. (2021) van Beek, Stijn W; Svensson, Elin M; Tiono, Alfred B; Okebe, Joseph; D'Alessandro, Umberto; Gonçalves, Bronner P; Bousema, Teun; Drakeley, Chris; Ter Heine, Rob

Profiles of Volatile Biomarkers Detect Tuberculosis from Skin. (2021) Vishinkin, Rotem; Busool, Rami; Mansour, Elias; Fish, Falk; Esmail, Ali; Kumar, Parveen; Gharaa, Alaa; Cancilla, John C; Torrecilla, Jose S; Skenders, Girts; Leja, Marcis; Dheda, Keertan; Singh, Sarman; Haick, Hossam

Ex vivo susceptibility to new antimalarial agents differs among human-infecting Plasmodium species. (2021) van Schalkwyk, Donelly A; Moon, Robert W; Duffey, Maëlle; Leroy, Didier; Sutherland, Colin J

Identification of Resistance Determinants for a Promising Antileishmanial Oxaborole Series. (2021) Van den Kerkhof, Magali; Leprohon, Philippe; Mabille, Dorien; Hendrickx, Sarah; Tulloch, Lindsay B; Wall, Richard J; Wyllie, Susan; Chatelain, Eric; Mowbray, Charles E; Braillard, Stéphanie; Ouellette, Marc; Maes, Louis; Caljon, Guy

Film-Forming Systems for the Delivery of DNDI-0690 to Treat Cutaneous Leishmaniasis. (2021) Van Bocxlaer, Katrien; McArthur, Kerri-Nicola; Harris, Andy; Alavijeh, Mo; Braillard, Stéphanie; Mowbray, Charles E; Croft, Simon L

Rapid Screening for Non-falciparum Malaria in Elimination Settings Using Multiplex Antigen and Antibody Detection: Post Hoc Identification of Plasmodium malariae in an Infant in Haiti. (2021) van den Hoogen, Lotus L; Herman, Camelia; Présumé, Jacquelin; Romilus, Ithamare; Existe, Alexandre; Boncy, Jacques; Joseph, Vena; Stresman, Gillian; Tetteh, Kevin KA; Drakeley, Chris; Chang, Michelle A; Lemoine, Jean F; Eisele, Thomas P; Rogier, Eric; Ashton, Ruth A

Pharmacokinetic / pharmacodynamic relationships of liposomal amphotericin B and miltefosine in experimental visceral leishmaniasis. (2021) Voak, Andrew A; Harris, Andy; Coteron-Lopez, Jose Miguel; Angulo-Barturen, Iñigo; Ferrer-Bazaga, Santiago; Croft, Simon L; Seifert, Karin

Single-dose administration and the influence of the timing of the booster dose on immunogenicity and efficacy of ChAdOx1 nCoV-19 (AZD1222) vaccine: a pooled analysis of four randomised trials. (2021) Voysey, Merryn; Costa Clemens, Sue Ann; Madhi, Shabir A; Weckx, Lily Y; Folegatti, Pedro M; Aley, Parvinder K; Angus, Brian; Baillie, Vicky L; Barnabas, Shaun L; Bhorat, Qasim E; Bibi, Sagida; Briner, Carmen; Cicconi, Paola; Clutterbuck, Elizabeth A; Collins, Andrea M; Cutland, Clare L; Darton, Thomas C; Dheda, Keertan; Dold, Christina; Duncan, Christopher JA; Emary, Katherine RW; Ewer, Katie J; Flaxman, Amy; Fairlie, Lee; Faust, Saul N; Feng, Shuo; Ferreira, Daniela M; Finn, Adam; Galiza, Eva; Goodman, Anna L; Green, Catherine M; Green, Christopher A; Greenland, Melanie; Hill, Catherine; Hill, Helen C; Hirsch, Ian; Izu, Alane; Jenkin, Daniel; Joe, Carina CD; Kerridge, Simon; Koen, Anthonet; Kwatra, Gaurav; Lazarus, Rajeka; Libri, Vincenzo; Lillie, Patrick J; Marchevsky, Natalie G; Marshall, Richard P; Mendes, Ana VA; Milan, Eveline P; Minassian, Angela M; McGregor, Alastair; Mujadidi, Yama F; Nana, Anusha; Padayachee, Sherman D; Phillips, Daniel J; Pittella, Ana; Plested, Emma; Pollock, Katrina M; Ramasamy, Maheshi N; Ritchie, Adam J; Robinson, Hannah; Schwarzbold, Alexandre V; Smith, Andrew; Song, Rinn; Snape, Matthew D; Sprinz, Eduardo; Sutherland, Rebecca K; Thomson, Emma C; Török, M Estée; Toshner, Mark; Turner, David PJ; Vekemans, Johan; Villafana, Tonya L; White, Thomas; Williams, Christopher J; Douglas, Alexander D; Hill, Adrian VS; Lambe, Teresa; Gilbert, Sarah C; Pollard, Andrew J; Oxford COVID Vaccine Trial Group

Pharmacokinetics and pharmacodynamics in the treatment of cutaneous leishmaniasis - challenges and opportunities. (2021) Van Bocxlaer, Katrien; Croft, Simon L

South african thoracic society position statement on post-acute sequelae of SARS-CoV-2 infection. (2021) Van Zyl-Smit, RN; Calligaro, GL; Dheda, K; Feldman, C; Kalla, IS; Koegelenberg, CFN; Lalloo, U; Perumal, R; Richards, GA; Wong, M

Klebsiella pneumoniae with capsule type K64 is overrepresented among invasive disease in Vietnam. (2021) Vu Thi Ngoc, Bich; Brisse, Sylvain; Dao Tuyet, Trinh; Vu Tien Viet, Dung; Holt, Kathryn E; Nguyen Vu, Trung; Tran Thi Kieu, Huong; Nguyen Thi Ngoc, Diep; van Doorn, H Rogier; Wertheim, Heiman FL

W

A year of genomic surveillance reveals how the SARS-CoV-2 pandemic unfolded in Africa. (2021) Wilkinson, Eduan; Giovanetti, Marta; Tegally, Houriiyah; San, James E; Lessells, Richard; Cuadros, Diego; Martin, Darren P; Rasmussen, David A; Zekri, Abdel-Rahman N; Sangare, Abdoul K; Ouedraogo, Abdoul-Salam; Sesay, Abdul K; Priscilla, Abechi; Kemi, Adedotun-Sulaiman; Olubusuyi, Adewunmi M; Oluwapelumi, Adeyemi OO; Hammami, Adnène; Amuri, Adrienne A; Sayed, Ahmad; Ouma, Ahmed EO; Elargoubi, Aida; Ajayi, Nnennaya A; Victoria, Ajogbasile F; Kazeem, Akano; George, Akpede; Trotter, Alexander J; Yahaya, Ali A; Keita, Alpha K; Diallo, Amadou; Kone, Amadou; Souissi, Amal; Chtourou, Amel; Gutierrez, Ana V; Page, Andrew J; Vinze, Anika; Iranzadeh, Arash; Lambisia, Arnold; Ismail, Arshad; Rosemary, Audu; Sylverken, Augustina; Femi, Ayoade; Ibrahimi, Azeddine; Marycelin, Baba; Oderinde, Bamidele S; Bolajoko, Bankole; Dhaala, Beatrice; Herring, Belinda L; Njanpop-Lafourcade, Berthe-Marie; Kleinhans, Bronwyn; McInnis, Bronwyn; Tegomoh, Bryan; Brook, Cara; Pratt, Catherine B; Scheepers, Cathrine; Akoua-Koffi, Chantal G; Agoti, Charles N; Peyrefitte, Christophe; Daubenberger, Claudia; Morang'a, Collins M; Nokes, D James; Amoako, Daniel G; Bugembe, Daniel L; Park, Danny; Baker, David; Doolabh, Deelan; Ssemwanga, Deogratius; Tshiabuila, Derek; Bassirou, Diarra; Amuzu, Dominic SY; Goedhals, Dominique; Omuoyo, Donwilliams O; Maruapula, Dorcas; Foster-Nyarko, Ebenezer; Lusamaki, Eddy K; Simulundu, Edgar; Ong'era, Edidah M; Ngabana, Edith N; Shumba, Edwin; El Fahime, Elmostafa; Lokilo, Emmanuel; Mukantwari, Enatha; Philomena, Eromon; Belarbi, Essia; Simon-Loriere, Etienne; Anoh, Etilé A; Leendertz, Fabian; Ajili, Faida; Enoch, Fakayode O; Wasfi, Fares; Abdelmoula, Fatma; Mosha, Fausta S; Takawira, Faustinos T; Derrar, Fawzi; Bouzid, Feriel; Onikepe, Folarin; Adeola, Fowotade; Muyembe, Francisca M; Tanser, Frank; Dratibi, Fred A; Mbunsu, Gabriel K; Thilliez, Gaetan; Kay, Gemma L; Githinji, George; van Zyl, Gert; Awandare, Gordon A; Schubert, Grit; Maphalala, Gugu P; Ranaivoson, Hafaliana C; Lemriss, Hajar; Anise, Happi; Abe, Haruka; Karray, Hela H; Nansumba, Hellen; Elgahzaly, Hesham A; Gumbo, Hlanai; Smeti, Ibtihel; Ayed, Ikhlas B; Odia, Ikponmwosa; Ben Boubaker, Ilhem Boutiba; Gaaloul, Imed; Gazy, Inbal; Mudau, Innocent; Ssewanyana, Isaac; Konstantinus, Iyaloo; Lekana-Douk, Jean B; Makangara, Jean-Claude C; Tamfum, Jean-Jacques M; Heraud, Jean-Michel; Shaffer, Jeffrey G; Giandhari, Jennifer; Li, Jingjing; Yasuda, Jiro; Mends, Joana Q; Kiconco, Jocelyn; Morobe, John M; Gyapong, John O; Okolie, Johnson C; Kayiwa, John T; Edwards, Johnathan A; Gyamfi, Jones; Farah, Jouali; Nakaseegu, Joweria; Ngoi, Joyce M; Namulondo, Joyce; Andeko, Julia C; Lutwama, Julius J; O'Grady, Justin; Siddle, Katherine; Adeyemi, Kayode T; Tumedi, Kefentse A; Said, Khadija M; Hae-Young, Kim; Duedu, Kwabena O; Belyamani, Lahcen; Fki-Berrajah, Lamia; Singh, Lavanya; Martins, Leonardo de O; Tyers, Lynn; Ramuth, Magalutcheemee; Mastouri, Maha; Aouni, Mahjoub; El Hefnawi, Mahmoud; Matsheka, Maitshwarelo I; Kebabonye, Malebogo; Diop, Mamadou; Turki, Manel; Paye, Marietou; Nyaga, Martin M; Mareka, Mathabo; Damaris, Matoke-Muhia; Mburu, Maureen W; Mpina, Maximillian; Nwando, Mba; Owusu, Michael; Wiley, Michael R; Youtchou, Mirabeau T; Ayekaba, Mitoha O; Abouelhoda, Mohamed; Seadawy, Mohamed G; Khalifa, Mohamed K; Sekhele, Mooko; Ouadghiri, Mouna; Diagne, Moussa M; Mwenda, Mulenga; Allam, Mushal; Phan, My VT; Abid, Nabil; Touil, Nadia; Rujeni, Nadine; Kharrat, Najla; Ismael, Nalia; Dia, Ndongo; Mabunda, Nedio; Hsiao, Nei-Yuan; Silochi, Nelson B; Nsenga, Ngoy; Gumede, Nicksy; Mulder, Nicola; Ndodo, Nnaemeka; Razanajatovo, Norosoa H; Iguosadolo, Nosamiefan; Judith, Oguzie; Kingsley, Ojide C; Sylvanus, Okogbenin; Peter, Okokhere; Femi, Oladiji; Idowu, Olawoye; Testimony, Olumade; Chukwuma, Omoruyi E; Ogah, Onwe E; Onwuamah, Chika K; Cyril, Oshomah; Faye, Ousmane; Tomori, Oyewale; Ondoa, Pascale; Combe, Patrice; Semanda, Patrick; Oluniyi, Paul E; Arnaldo, Paulo; Quashie, Peter K; Dussart, Philippe; Bester, Phillip A; Mbala, Placide K; Ayivor-Djanie, Reuben; Njouom, Richard; Phillips, Richard O; Gorman, Richmond; Kingsley, Robert A; Carr, Rosina AA; El Kabbaj, Saâd; Gargouri, Saba; Masmoudi, Saber; Sankhe, Safietou; Lawal, Salako B; Kassim, Samar; Trabelsi, Sameh; Metha, Samar; Kammoun, Sami; Lemriss, Sanaâ; Agwa, Sara HA; Calvignac-Spencer, Sébastien; Schaffner, Stephen F; Doumbia, Seydou; Mandanda, Sheila M; Aryeetey, Sherihane; Ahmed, Shymaa S; Elhamoumi, Siham; Andriamandimby, Soafy; Tope, Sobajo; Lekana-Douki, Sonia; Prosolek, Sophie; Ouangraoua, Soumeya; Mundeke, Steve A; Rudder, Steven; Panji, Sumir; Pillay, Sureshnee; Engelbrecht, Susan; Nabadda, Susan; Behillil, Sylvie; Budiaki, Sylvie L; van der Werf, Sylvie; Mashe, Tapfumanei; Aanniz, Tarik; Mohale, Thabo; Le-Viet, Thanh; Schindler, Tobias; Anyaneji, Ugochukwu J; Chinedu, Ugwu; Ramphal, Upasana; Jessica, Uwanibe; George, Uwem; Fonseca, Vagner; Enouf, Vincent; Gorova, Vivianne; Roshdy, Wael H; Ampofo, William K; Preiser, Wolfgang; Choga, Wonderful T; Bediako, Yaw; Naidoo, Yeshnee; Butera, Yvan; de Laurent, Zaydah R; Sall, Amadou A; Rebai, Ahmed; von Gottberg, Anne; Kouriba, Bourema; Williamson, Carolyn; Bridges, Daniel J; Chikwe, Ihekweazu; Bhiman, Jinal N; Mine, Madisa; Cotten, Matthew; Moyo, Sikhulile; Gaseitsiwe, Simani; Saasa, Ngonda; Sabeti, Pardis C; Kaleebu, Pontiano; Tebeje, Yenew K; Tessema, Sofonias K; Happi, Christian; Nkengasong, John; de Oliveira, Tulio

Sialic Acid Binding Sites in VP2 of Bluetongue Virus and Their Use during Virus Entry. (2021) Wu, Weining; Roy, Polly

Editorial: Platelets as Players in Neuropathologies: Novel Diagnostic and Therapeutic Targets. (2021) Wassmer, Samuel C; Humpel, Christian; Orian, Jacqueline M

Trycycler: consensus long-read assemblies for bacterial genomes. (2021) Wick, Ryan R; Judd, Louise M; Cerdeira, Louise T; Hawkey, Jane; Méric, Guillaume; Vezina, Ben; Wyres, Kelly L; Holt, Kathryn E

Genomic Diversity and Antimicrobial Resistance of Haemophilus Colonizing the Airways of Young Children with Cystic Fibrosis. (2021) Watts, Stephen C; Judd, Louise M; Carzino, Rosemary; Ranganathan, Sarath; Holt, Kathryn E

Recovery of small plasmid sequences via Oxford Nanopore sequencing. (2021) Wick, Ryan R; Judd, Louise M; Wyres, Kelly L; Holt, Kathryn E

Global patterns of submicroscopic Plasmodium falciparum malaria infection: insights from a systematic review and meta-analysis of population surveys. (2021) Whittaker, Charles; Slater, Hannah; Nash, Rebecca; Bousema, Teun; Drakeley, Chris; Ghani, Azra C; Okell, Lucy C

Genomic surveillance of antimicrobial resistant bacterial colonisation and infection in intensive care patients. (2021) Wyres, Kelly L; Hawkey, Jane; Mirčeta, Mirianne; Judd, Louise M; Wick, Ryan R; Gorrie, Claire L; Pratt, Nigel F; Garlick, Jill S; Watson, Kerrie M; Pilcher, David V; McGloughlin, Steve A; Abbott, Iain J; Macesic, Nenad; Spelman, Denis W; Jenney, Adam WJ; Holt, Kathryn E

Trypanosoma cruzi : Where is it? Does it ever sleep? Why is a sterile outcome rarely achieved? (2021) Ward, A

Does integrated community case management (iCCM) target health inequities and treatment delays? Evidence from an analysis of Demographic and Health Surveys data from 21 countries in the period 2010 to 2018. (2021) Winskill, Peter; Mousa, Andria; Oresanya, Olusola; Counihan, Helen; Okell, Lucy C; Walker, Patrick G

Phylogenetic Characterization of Crimean-Congo Hemorrhagic Fever Virus Detected in African Blue Ticks Feeding on Cattle in a Ugandan Abattoir. (2021) Wampande, Eddie M; Waiswa, Peter; Allen, David J; Hewson, Roger; Frost, Simon DW; Stubbs, Samuel CB

An integrated in silico immuno-genetic analytical platform provides insights into COVID-19 serological and vaccine targets. (2021) Ward, Daniel; Higgins, Matthew; Phelan, Jody E; Hibberd, Martin L; Campino, Susana; Clark, Taane G

Transmission of Artemisinin-Resistant Malaria Parasites to Mosquitoes under Antimalarial Drug Pressure. (2021) Witmer, Kathrin; Dahalan, Farah A; Delves, Michael J; Yahiya, Sabrina; Watson, Oliver J; Straschil, Ursula; Chiwcharoen, Darunee; Sornboon, Boodtee; Pukrittayakamee, Sasithon; Pearson, Richard D; Howick, Virginia M; Lawniczak, Mara KN; White, Nicholas J; Dondorp, Arjen M; Okell, Lucy C; Chotivanich, Kesinee; Ruecker, Andrea; Baum, Jake

X

Bluetongue virus capsid protein VP5 perforates membranes at low endosomal pH during viral entry. (2021) Xia, Xian; Wu, Weining; Cui, Yanxiang; Roy, Polly; Zhou, Z Hong

Y

Gliding motility of Plasmodium merozoites. (2021) Yahata, Kazuhide; Hart, Melissa N; Davies, Heledd; Asada, Masahito; Wassmer, Samuel C; Templeton, Thomas J; Treeck, Moritz; Moon, Robert W; Kaneko, Osamu

Building Scientific Capability and Reducing Biological Threats: The Effect of Three Cooperative Bio-Research Programs in Kazakhstan. (2021) Yeh, Kenneth B; Tabynov, Kairat; Parekh, Falgunee K; Maltseva, Elina; Skiba, Yuriy; Shapiyeva, Zhanna; Sansyzbai, Ablay; Frey, Stefan; Essbauer, Sandra; Hewson, Roger; Richards, Allen L; Hay, John

Operationalizing Cooperative Research for Infectious Disease Surveillance: Lessons Learned and Ways Forward. (2021) Yeh, Kenneth B; Parekh, Falgunee K; Tabynov, Kairat; Tabynov, Kaissar; Hewson, Roger; Fair, Jeanne M; Essbauer, Sandra; Hay, John

Risk factors for Plasmodium falciparum infection in pregnant women in Burkina Faso: a community-based cross-sectional survey. (2021) Yaro, Jean Baptiste; Ouedraogo, Alphonse; Diarra, Amidou; Sombié, Salif; Ouedraogo, Z Amidou; Nébié, Issa; Drakeley, Chris; Sirima, Sodiomon B; Tiono, Alfred B; Lindsay, Steven W; Wilson, Anne L

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