Items where Author is "Bbosa, Nicholas"

Number of items: 13.
2022
  • Rapid Replacement of SARS-CoV-2 Variants by Delta and Subsequent Arrival of Omicron, Uganda, 2021. (2022) Bbosa, Nicholas; Ssemwanga, Deogratius; Namagembe, Hamidah; Kiiza, Ronald; Kiconco, Jocelyn; Kayiwa, John; Lutalo, Tom; Lutwama, Julius; Ssekagiri, Alfred; Ssewanyana, Isaac; Nabadda, Susan; Kyobe-Bbosa, Henry; Giandhari, Jennifer; Pillay, Sureshnee; Ramphal, Upasana; Ramphal, Yajna; Naidoo, Yeshnee; Tshiabuila, Derek; Tegally, Houriiyah; San, Emmanuel J; Wilkinson, Eduan; de Oliveira, Tulio; Kaleebu, Pontiano
  • HIV-1 drug resistance genotyping success rates and correlates of Dried-blood spots and plasma specimen genotyping failure in a resource-limited setting. (2022) Omooja, Jonah; Bbosa, Nicholas; Lule, Dan Bugembe; Nannyonjo, Maria; Lunkuse, Sandra; Nassolo, Faridah; Nabirye, Stella Esther; Suubi, Hamidah Namagembe; Kaleebu, Pontiano; Ssemwanga, Deogratius
  • QuasiFlow: a Nextflow pipeline for analysis of NGS-based HIV-1 drug resistance data. (2022) Ssekagiri, Alfred; Jjingo, Daudi; Lujumba, Ibra; Bbosa, Nicholas; Bugembe, Daniel L; Kateete, David P; Jordan, I King; Kaleebu, Pontiano; Ssemwanga, Deogratius
    • 2021
  • Phylogenetic Networks and Parameters Inferred from HIV Nucleotide Sequences of High-Risk and General Population Groups in Uganda: Implications for Epidemic Control. (2021) Bbosa, Nicholas; Ssemwanga, Deogratius; Nsubuga, Rebecca N; Kiwanuka, Noah; Bagaya, Bernard S; Kitayimbwa, John M; Ssekagiri, Alfred; Yebra, Gonzalo; Kaleebu, Pontiano; Leigh-Brown, Andrew
  • Employing phylogenetic tree shape statistics to resolve the underlying host population structure. (2021) Kayondo, Hassan W; Ssekagiri, Alfred; Nabakooza, Grace; Bbosa, Nicholas; Ssemwanga, Deogratius; Kaleebu, Pontiano; Mwalili, Samuel; Mango, John M; Leigh Brown, Andrew J; Saenz, Roberto A; Galiwango, Ronald; Kitayimbwa, John M
    • 2020
  • Short Communication: Choosing the Right Program for the Identification of HIV-1 Transmission Networks from Nucleotide Sequences Sampled from Different Populations. (2020) Bbosa, Nicholas; Ssemwanga, Deogratius; Kaleebu, Pontiano
  • Phylogenetic and Demographic Characterization of Directed HIV-1 Transmission Using Deep Sequences from High-Risk and General Population Cohorts/Groups in Uganda. (2020) Bbosa, Nicholas; Ssemwanga, Deogratius; Ssekagiri, Alfred; Xi, Xiaoyue; Mayanja, Yunia; Bahemuka, Ubaldo; Seeley, Janet; Pillay, Deenan; Abeler-Dörner, Lucie; Golubchik, Tanya; Fraser, Christophe; Kaleebu, Pontiano; Ratmann, Oliver
  • Pervasive and non-random recombination in near full-length HIV genomes from Uganda. (2020) Grant, Heather E; Hodcroft, Emma B; Ssemwanga, Deogratius; Kitayimbwa, John M; Yebra, Gonzalo; Esquivel Gomez, Luis Roger; Frampton, Dan; Gall, Astrid; Kellam, Paul; de Oliveira, Tulio; Bbosa, Nicholas; Nsubuga, Rebecca N; Kibengo, Freddie; Kwan, Tsz Ho; Lycett, Samantha; Kao, Rowland; Robertson, David L; Ratmann, Oliver; Fraser, Christophe; Pillay, Deenan; Kaleebu, Pontiano; Leigh Brown, Andrew J
  • High Levels of Acquired HIV Drug Resistance Following Virological Nonsuppression in HIV-Infected Women from a High-Risk Cohort in Uganda. (2020) Segujja, Farouk; Omooja, Jonah; Lunkuse, Sandra; Nanyonjo, Maria; Nabirye, Stella E; Nassolo, Faridah; Bugembe, Daniel L; Bbosa, Nicholas; Kateete, David P; Ssenyonga, William; Mayanja, Yunia; Nsubuga, Rebecca N; Seeley, Janet; Kaleebu, Pontiano; Ssemwanga, Deogratius
  • The Molecular Epidemiology and Transmission Dynamics of HIV Type 1 in a General Population Cohort in Uganda. (2020) Ssemwanga, Deogratius; Bbosa, Nicholas; Nsubuga, Rebecca N; Ssekagiri, Alfred; Kapaata, Anne; Nannyonjo, Maria; Nassolo, Faridah; Karabarinde, Alex; Mugisha, Joseph; Seeley, Janet; Yebra, Gonzalo; Leigh Brown, Andrew; Kaleebu, Pontiano
    • 2019
  • HIV subtype diversity worldwide. (2019) Bbosa, Nicholas; Kaleebu, Pontiano; Ssemwanga, Deogratius
  • Phylogeography of HIV-1 suggests that Ugandan fishing communities are a sink for, not a source of, virus from general populations. (2019) Bbosa, Nicholas; Ssemwanga, Deogratius; Nsubuga, Rebecca N; Salazar-Gonzalez, Jesus F; Salazar, Maria G; Nanyonjo, Maria; Kuteesa, Monica; Seeley, Janet; Kiwanuka, Noah; Bagaya, Bernard S; Yebra, Gonzalo; Leigh-Brown, Andrew; Kaleebu, Pontiano
  • Rates of HIV-1 virological suppression and patterns of acquired drug resistance among fisherfolk on first-line antiretroviral therapy in Uganda. (2019) Omooja, Jonah; Nannyonjo, Maria; Sanyu, Grace; Nabirye, Stella E; Nassolo, Faridah; Lunkuse, Sandra; Kapaata, Anne; Segujja, Farouk; Kateete, David Patrick; Ssebaggala, Eric; Bbosa, Nicholas; Aling, Emmanuel; Nsubuga, Rebecca N; Kaleebu, Pontiano; Ssemwanga, Deogratius