COVID-19 transmission dynamics underlying epidemic waves in Kenya.

Samuel PC Brand ORCID logo; John Ojal ORCID logo; Rabia Aziza ORCID logo; Vincent Were ORCID logo; Emelda A Okiro ORCID logo; Ivy K Kombe ORCID logo; Caroline Mburu ORCID logo; Morris Ogero ORCID logo; Ambrose Agweyu ORCID logo; George M Warimwe ORCID logo; +23 more... James Nyagwange ORCID logo; Henry Karanja ORCID logo; John NGitonga; Daisy Mugo ORCID logo; Sophie Uyoga ORCID logo; Ifedayo MO Adetifa ORCID logo; J Anthony G Scott ORCID logo; Edward Otieno ORCID logo; NicksonMurunga; Mark Otiende ORCID logo; Lynette I Ochola-Oyier ORCID logo; Charles NAgoti; GeorgeGithinji; Kadondi Kasera ORCID logo; Patrick Amoth ORCID logo; MercyMwangangi; RashidAman; Wangari Ng'ang'a ORCID logo; Benjamin Tsofa ORCID logo; PhilipBejon; Matt J Keeling ORCID logo; D James Nokes ORCID logo; Edwine Barasa ORCID logo; (2021) COVID-19 transmission dynamics underlying epidemic waves in Kenya. Science (New York, N.Y.), 374 (6570). pp. 989-994. ISSN 0036-8075 DOI: 10.1126/science.abk0414
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Policy decisions on COVID-19 interventions should be informed by a local, regional and national understanding of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) transmission. Epidemic waves may result when restrictions are lifted or poorly adhered to, variants with new phenotypic properties successfully invade, or infection spreads to susceptible subpopulations. Three COVID-19 epidemic waves have been observed in Kenya. Using a mechanistic mathematical model, we explain the first two distinct waves by differences in contact rates in high and low social-economic groups, and the third wave by the introduction of higher-transmissibility variants. Reopening schools led to a minor increase in transmission between the second and third waves. Socioeconomic and urban–rural population structure are critical determinants of viral transmission in Kenya.



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