Revealing the extent of the first wave of the COVID-19 pandemic in Kenya based on serological and PCR-test data

JohnOjal; Samuel PC Brand ORCID logo; VincentWere; Emelda A Okiro ORCID logo; Ivy KKombe; CarolineMburu; Rabia Aziza ORCID logo; Morris Ogero ORCID logo; AmbroseAgweyu; George M Warimwe ORCID logo; +16 more... Sophie Uyoga ORCID logo; Ifedayo MO Adetifa ORCID logo; J Anthony G Scott ORCID logo; Edward Otieno ORCID logo; Lynette IOchola-Oyier; Charles N Agoti ORCID logo; KadondiKasera; PatrickAmoth; MercyMwangangi; RashidAman; WangariNg’ang’a; Benjamin Tsofa ORCID logo; Philip Bejon ORCID logo; EdwineBarasa; Matt J Keeling ORCID logo; D James Nokes ORCID logo; (2021) Revealing the extent of the first wave of the COVID-19 pandemic in Kenya based on serological and PCR-test data. Wellcome Open Research, 6. p. 127. DOI: 10.12688/wellcomeopenres.16748.1
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<ns4:p>Policymakers in Africa need robust estimates of the current and future spread of SARS-CoV-2. We used national surveillance PCR test, serological survey and mobility data to develop and fit a county-specific transmission model for Kenya up to the end of September 2020, which encompasses the first wave of SARS-CoV-2 transmission in the country. We estimate that the first wave of the SARS-CoV-2 pandemic peaked before the end of July 2020 in the major urban counties, with 30-50% of residents infected. Our analysis suggests, first, that the reported low COVID-19 disease burden in Kenya cannot be explained solely by limited spread of the virus, and second, that a 30-50% attack rate was not sufficient to avoid a further wave of transmission.</ns4:p>



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